Daucus carota (carrot): 108198483
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Entry
108198483 CDS
T05350
Name
(RefSeq) heat shock cognate 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
dcr04141
Protein processing in endoplasmic reticulum
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108198483
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108198483
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108198483
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108198483
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108198483
03009 Ribosome biogenesis [BR:
dcr03009
]
108198483
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108198483
04131 Membrane trafficking [BR:
dcr04131
]
108198483
03051 Proteasome [BR:
dcr03051
]
108198483
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108198483
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108198483
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108198483
Spliceosome [BR:
dcr03041
]
Complex B
Other components
Prp19 complex
108198483
Complex C
Prp19-CDC5 complex
108198483
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108198483
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP70 / DNAK
108198483
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108198483
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108198483
Proteasome [BR:
dcr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108198483
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108198483
Exosome [BR:
dcr04147
]
Exosomal proteins
Proteins found in most exosomes
108198483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Alp7A_like_C
DDR
FGGY_C
DUF6886
FYTT
Motif
Other DBs
NCBI-GeneID:
108198483
NCBI-ProteinID:
XP_017221725
UniProt:
A0AAF1BB94
LinkDB
All DBs
Position
8:complement(28334536..28336830)
Genome browser
AA seq
620 aa
AA seq
DB search
MAKNGVAVGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSCVAFTDTERFIGDAAKNQS
ALNPTSTIFDAKRLIGRRFSDSTVQSDMKLWPFKVVGDFGDKPKIVVNYRGVEKEFSPEE
LSSMVLNKMKDVAEEYLGKEVKDVVITVPAHFNDSQRQATKDAAKIAGLDVLRVLVEPTA
AAVAYGLEHKLTSNPMAQKNVLIFDLGGGTFDVSLLKIRKDNIEVQATAGNTHLGGEDFD
NRLLNHFVEEFKRKHKKDICRNAKSLRRLKIACEKAKRVLSYNNKTTIDVDALYEGIDYS
AKITRARFENLNMDLFLSCIETVKKCLEDARMDKSKVHDIVLVGGSTRIPKVQQLLQQFF
DREELCKNINPDEAVAYGAAVEAAILSGEDNQIIKNLMLLDVTPLSLGIAVEGGAMSVII
PRNTTIPNSVEKQFSTAEDDQTSATIAVFEGERTRITDNSLLGHFELSDLPPGPRGSAQI
SVMFTIDANGVLSVFAENKATGVRNSIKIIRRGTLKEDEIERMIKEAEQFKIEDEEFTRK
NNAMLAFKDCIYKMRDFFKRNNKLEASVKKMIKYSFEDAIEWLDANKNAEVYEYEFKKKQ
FEAICNHLVAGIADLKIEEV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaatggagtggctgttggaattgatctaggcacaacatattcttgtgttgga
gtttggcaacatgatcgagttgaaatcattgctaatgatcagggtaatagaactacacca
tcatgtgttgctttcactgatacggagcgtttcattggtgatgctgctaaaaatcaatct
gcccttaatcctacaagcactatttttgatgctaaaaggttgattggaaggaggttttcg
gattcaaccgtgcaaagtgacatgaagctttggcctttcaaggtcgttggtgattttggt
gataagccaaagattgttgtgaattacagaggtgtggagaaagaattctcaccggaggag
ttatcttccatggttctcaataagatgaaggatgtagcagaagagtacctgggaaaggaa
gtgaaagatgttgttataactgtccctgcacacttcaatgactcacagcgccaggctaca
aaagatgcagcaaaaatagcgggacttgatgtactgcgggttcttgttgagcccacagct
gctgcagtcgcttatggtcttgaacacaagcttacaagcaatcctatggcgcaaaagaat
gttcttatatttgatttaggtggtggtacttttgatgtttctctacttaagatcagaaag
gataatattgaagtacaggctactgctggcaatactcacctcggaggtgaggactttgac
aatcgtttgctaaaccactttgttgaggaattcaagaggaagcacaaaaaggacatctgt
cgaaatgctaaatctttaagaagattgaaaattgcttgcgagaaggcaaagagggttctt
tcttataataacaagacgactattgatgttgatgctttgtatgagggaattgattactct
gcaaagatcacacgtgccagatttgagaatttaaacatggatctttttctgagttgtatc
gagactgtgaaaaaatgtttggaagatgcgcggatggacaagagtaaagtccatgatatt
gttcttgtgggcggatccacgagaattccaaaagtgcaacaactattgcaacagtttttt
gatagggaggaactttgcaagaacataaatcctgatgaggctgttgcttatggcgcagct
gtcgaagctgcaatattaagcggagaggataatcagatcatcaagaacttaatgttgctt
gatgttactcctctttctctcgggattgcagttgaaggaggtgccatgtctgtaattatt
ccaaggaacacaaccattcccaactcggttgaaaaacaattctctacagctgaggatgat
cagaccagtgctacgattgcagtttttgagggtgagagaacaagaatcacagacaatagc
ttgcttggacattttgagctatctgacctgcctcctggcccgagaggcagtgctcaaatc
tctgtaatgttcacaattgatgctaatggggtgttaagtgttttcgcggagaataaagct
actggagtgaggaatagcattaagatcatcagaagaggaacgcttaaagaggatgagatt
gaacggatgataaaagaagctgaacaattcaagattgaagacgaggagttcacaagaaag
aacaacgcaatgcttgcatttaaggactgtatatataaaatgcgagactttttcaaaaga
aacaacaagcttgaagcgtctgttaagaagatgataaaatattccttcgaggatgctatc
gaatggcttgatgcaaataagaatgctgaagtttacgagtacgagttcaagaagaagcag
tttgaagcaatctgcaatcacctagttgctggcattgcagatctgaagatcgaggaagtc
tag
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