Daucus carota (carrot): 108198564
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Entry
108198564 CDS
T05350
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108198564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108198564
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108198564
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Motif
Pfam:
cNMP_binding
IQ_SCN5A_C
IQ
Motif
Other DBs
NCBI-GeneID:
108198564
NCBI-ProteinID:
XP_017221803
UniProt:
A0A175YQL8
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Position
8:31359150..31362696
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AA seq
616 aa
AA seq
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MHRRTPIRGKTPSVPVLDPRTRKLKFLNRFSVLARGASLAIDPLFLFAITASPGPKPCIY
IDGTMLLFATLLRTFVDLLHGMHLWLKFRMAYVAKESLVSGSGELVWDARAVVKKYVGSL
KGFWFDVYVIFPVPQAVYWLILPKLLKEGKVESVMTITQTIFLLQFFTKLYHSFYLMRGV
KKVTGYIFGTAWWGLILNLIAYFLASHVSGGFWYILAMQRVAECLKKQCLESKHCETLSW
TCPREICYSSFANLCLANSTMKANFSTCMDQNGDFPYGNYAFVLPLVIKNSNVVKILYSD
LWGLMSLSTMGSNFTPTSRSIEVIFAIIMVLAGLALFTCLIGNIQVFFYSVTPRRRQMQL
RYRDIKWWMERRQLPLELRERVRLYELERWKSIGGQDEMQLMKNMPDGLRRDIKRYLCLD
LVRKVPLFDNLDDLILDHICDRVIPMIYSKDEKILKEGEPVQRMVFIVKGYVLRRQNITK
GMVTTTLIEPGGFIGDELISWCLRMPFVDRFPPSSATFTCLDPIEAYGLDSDQLQYITNH
FRYTFLRGELKYKTRYYSSNWRSWAAVNIQFAWRRYLQRTRGNSMNRGTGNGGSSDQKLR
HYAAMFMSLRPKDHLY
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcacagacgtactccaatacgaggaaaaacaccctccgttcccgtcctcgatccccga
acccgaaaactaaaattcctaaaccgattcagtgttcttgctcgtggcgcttccttggcc
atcgaccctctattcctctttgccataacagcctcccctggtccgaaaccatgcatttat
attgacggcactatgttattattcgccaccttgttacgcacttttgtcgatttattacat
ggcatgcatctctggctgaagttcaggatggcttacgtggccaaagagtcgctggtcagc
ggcagcggagagctggtgtgggatgcacgcgccgtcgtgaagaagtatgttgggtcgctc
aagggcttttggttcgacgtgtatgtcatatttccggttccgcaggctgtatactggtta
atattaccaaaactactaaaagaaggaaaggtagaaagtgtaatgactataactcagaca
atcttcttgctgcaattttttactaagctgtaccacagcttctacctaatgcgaggagtc
aagaaggtcacaggctacattttcggcactgcttggtggggtttaatcctcaatctcatc
gcttattttcttgcttcacatgtgtcaggggggttctggtatatactggcgatgcaacgt
gttgcagaatgcctgaagaaacaatgccttgaaagcaaacattgtgagacactttcttgg
acttgtccaagagagatttgttacagcagctttgcaaatttgtgtcttgccaattccacc
atgaaggccaatttctcgacctgcatggaccaaaacggagattttccttatggaaactat
gcctttgtgctgcctctcgttattaagaactctaacgttgtcaaaattctctattcggac
ctctggggactcatgtctctcagcactatgggcagtaatttcacccctacgagtcggtca
attgaagtgatttttgccataatcatggtgctggcaggcttggcactctttacttgtcta
atcgggaatatccaggtgtttttttactctgtgacacctagacggagacaaatgcaattg
agatacagagacatcaagtggtggatggaacggagacagctaccactggagctgagggaa
agagtccgactttatgaactcgagagatggaaaagtataggtggccaagatgagatgcaa
ctcatgaaaaatatgccggatggactgagaagagatatcaagcgttatctctgcttggac
ttggtgagaaaggtaccactgtttgacaacttggatgaccttatcctcgaccacatttgt
gaccgggttatacccatgatctactctaaagatgaaaagattctgaaagaaggtgaacca
gtacagcgcatggtgttcatcgtaaaaggttatgttctgagaaggcaaaacatcacaaag
ggcatggtaacaaccactttgattgaacccggtggcttcattggagatgaactcatctcc
tggtgccttcgtatgccatttgtagatcgtttcccgccttcatcagcaacattcacttgc
ttggaccctattgaggcatatggtcttgattctgatcagcttcaatatataacaaatcat
tttcgttacacattcttacgtggagaacttaagtacaaaacaaggtattactcttcaaat
tggaggtcatgggctgctgtcaatatacaatttgcctggagacgatacttgcagaggact
cgaggtaattctatgaatcgtggcacgggtaatggtggtagcagtgaccagaaactccgc
cactatgctgcaatgttcatgtccctgaggcctaaagaccacctctactaa
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