Daucus carota (carrot): 108198594
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Entry
108198594 CDS
T05350
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108198594
03036 Chromosome and associated proteins [BR:
dcr03036
]
108198594
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108198594
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108198594
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108198594
microRNA pathway
RISC loading complex
108198594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
BetaGal_dom2
Motif
Other DBs
NCBI-GeneID:
108198594
NCBI-ProteinID:
XP_017221832
UniProt:
A0A175YRN5
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Position
8:complement(32452309..32458285)
Genome browser
AA seq
840 aa
AA seq
DB search
MEAKKPIARCGLASKGKKIQLLTNHYKVNVKNVDGHFFQYTVAFFYEDGRPVEGKGIKTQ
VLDCVHDTYKAEVEGKDFAYDGEKSLFTVGALPKNKLEFTVVLKDNSSNRNNQSKSYKVE
ISFAAKIPMQAIAQALRGQDSKNSQEAIRVLNIIVRQHAAKQGCRFERQLCFNVNEFSDL
GGGVLGYHGFNSSFRTTQGGLSLNIDSIMVIKPGPVVDFLIANQNAKDSFSLDWATANQV
LKGLRVKTSSTNTAYKITGLSDEICKKLMFSMKRRGEKDENGEPLMTELSVYDYFVNIRN
IPLCYSGDLPCIIVGNPKRPTYIPLELCSLVSLQHYPKALTTLQPGSLVEKSKQKPQDRM
TTLTNGPQINNYADEPLLRACGVSIINKFTEVDGRMLAAPRIRVGHLETIAPHNGRWNFS
EKKLLQPTTISEWAVVNFSAKCNMQSLINDLIKCGELKGMNFLSSPVVIEESPQHRRDSP
LVRVEKMFKFLFSKLPYAPQFLLCVLPERKSPLYGHWKRNCQVVHGIYTQCIGPKIYTRK
GLSYVVDQRLMSVLLKINAKLGGLNSKFAIGYARSISQKLKAGSLIIGMTLCRGSSDVPS
IAAVVSSGEGPLSAKYRASVHTQSPKVKMIASLFTRVADNKDDGIMSEILDDYYMRSGSR
RPEQIIIFRNGVSESQFNQVLNFELNQIIEACKFKDGKWCPKFVVIIAQKSRHTKFFQPT
SADNVPAGTVVDNKICHPRNNDFYLCAQAGMVGTTRPTHYHVLLDEIGFSPDEMQKFVHF
LCYQYQGSTTATSVVAPIHYARLAATQTRKFTMYDDTSETCSNHGGGTVHEKLRNSMFFV
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaagaagcctatagctaggtgtggcctagcatcaaaaggcaagaagattcaa
cttcttacgaatcactataaagtgaatgttaaaaatgtcgatggacatttttttcagtat
actgttgcctttttctatgaggatggccgtccagttgaaggtaaaggtattaaaacccaa
gtgcttgattgtgttcatgacacatacaaggctgaggtggaagggaaagacttcgcttat
gatggtgaaaagagtctgtttacagttggagctcttcctaaaaacaagcttgagttcact
gttgtgcttaaggataactcatccaataggaacaatcaatctaagtcttacaaggttgag
atatcctttgctgcgaagattcctatgcaggccattgcacaagctttacgtggtcaggac
tcgaagaactctcaggaggccataagggttctaaatatcatcgtcagacagcatgcagct
aaacagggatgccgttttgaacgccagttgtgctttaacgtgaatgagttttctgatttg
gggggtggcgtccttggttatcatggatttaattcaagttttcggaccacacagggaggt
ttgtcactaaatatagacagcataatggttattaagcctggacctgttgttgatttcctg
atagccaatcagaatgccaaggattcattttctcttgactgggcgacggccaatcaagtg
ctgaaaggtttaagggtgaagaccagttcaactaacactgcgtacaagattacaggactc
agcgatgaaatctgcaaaaaacttatgttttcgatgaagcggagaggtgaaaaagatgag
aatggggaaccactaatgactgaattatctgtttatgattattttgtaaacattagaaat
attcctctgtgttactctggtgatcttccctgcattattgttggaaaccccaagcgtcca
acatatatccctctagagctttgttcactggtttccttgcaacattatccaaaagctctt
accactcttcaaccagggtcattggtggagaaatcaaagcaaaagccccaagataggatg
acaacattgacaaacggtccacaaatcaacaattatgctgacgagcctttgttgcgtgcc
tgcggtgtttctattattaataagttcactgaagtagatgggcgcatgctggcagcacct
aggatacgggtcggacatttagaaaccatagcaccccacaacggtcgctggaatttcagc
gaaaagaaactcttgcagcctacaacaattagtgaatgggctgttgtcaacttctctgct
aagtgcaacatgcaatccctaataaatgatcttataaaatgcggggagttaaaaggaatg
aattttttgagctctcctgtggtgatcgaggaaagtccacagcacaggcgggattctcct
cttgttagagttgaaaagatgttcaaatttttgttctcaaaacttccatacgccccacaa
tttttgctctgtgtacttcctgagaggaaatcacctctatatggtcactggaaaagaaat
tgtcaagttgtccatggaatttatacacagtgcattggtcctaagatttatacaagaaaa
ggcctttcttatgtagttgaccaacgtctgatgagtgtccttctaaagatcaatgcaaag
cttggtgggctgaattcgaagttcgcaattggatatgcccgtagcatttctcaaaaacta
aaagctggctcacttatcattgggatgacgctctgccgtggctcttctgatgttccatct
attgctgcggttgttagttccggagaggggccactgagcgcaaagtatagggcatcagtt
catactcagtccccaaaggttaagatgatagcctctctctttaccagagttgctgacaac
aaagatgatggaataatgagtgagattttggatgactattacatgaggtcagggagcagg
agacccgaacaaatcattatatttaggaatggtgttagcgaatcacagttcaatcaggtt
ctgaattttgaattgaatcaaattattgaggcgtgcaagttcaaggatgggaaatggtgc
ccaaagtttgttgtcataattgcacaaaagagtcgacatacaaagtttttccagccaaca
tctgctgacaatgtccccgctggaactgttgttgacaataagatctgtcatcctcggaac
aatgatttctacttgtgtgctcaggctggaatggttggtactacaaggccaacccattat
cacgttttgttggatgaaattggtttttccccggatgagatgcagaaatttgttcatttt
ctgtgctaccagtaccagggaagcacaactgctacttctgtagttgctccaattcattat
gcacgcttggcagccactcagacaaggaagtttacaatgtacgatgacacttcagaaacg
tgttcaaaccatggtggtgggaccgttcatgaaaaactgcgaaattccatgttctttgtc
taa
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