Daucus carota (carrot): 108198886
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Entry
108198886 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108198886 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108198886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108198886
03012 Translation factors [BR:
dcr03012
]
108198886
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108198886
Translation factors [BR:
dcr03012
]
Eukaryotic type
Release factors
108198886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
MMR_HSR1
DUF4045
Motif
Other DBs
NCBI-GeneID:
108198886
NCBI-ProteinID:
XP_017222144
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All DBs
Position
8:complement(12773999..12784032)
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AA seq
626 aa
AA seq
DB search
MEAEKRRVPSQVVELADVNVLLVGHEGAGTSTFFNNFLKLGKKDKSSQSMHMTQTIRYFE
TKTMRGYISEHLSWYHHVPDLMSWGSGAGIAILVISGAENDPLSDEEKLKQIVQRVYLIR
FLGIPKIVIVINKMDDPTYSLTRFMELKKSVVDVLKRAGYDYKNDTMSVPISGKSGLNIQ
TMTRHLRYSGKCLFETLATIDVSQLAMRVTSDQTWSPKEVEELGLFEELFKIDTSIDKDQ
TDQSKATLWYRRAKIAGKLQLFNAFQDADKAVECNLDLSNNPEYGEEVNDPFLYKIKGDL
HYSRQSFDLARENYLHAYEIFNKQRWKKAVEKLQELICTSELLQSEEEEKLKTQTKKKGK
NKGEKKEELLEENEELKEEKKEEHFDEKKDDELKEEKKKEEIGEKKDDDSILKISIVTDF
SLDAKPQDGVYSGYKIRADISLPISIIRCSDYQKQNYQKLLSLGDIGPHVLSIHDMYDFT
IEEESSTFFVVQPIKSVDYYYFLKFEDFRNRVKIDEGDKESILTKWWLFIQPEFQKKIRD
IVYGLIFLFLKRQKCKSSMYVMNDADGKVLPSMDPNASDGDYLDDLVKKMKSIVKQPHLG
HKSASKWLPIDLVHLFNSFSKECCMF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagaaaagaggcgagttccttctcaagtagttgagttggcggatgtgaatgtt
ttactcgttgggcatgagggtgctggcacatcaacattttttaacaattttcttaagcta
ggtaaaaaggataaaagtagtcaaagcatgcacatgacacaaactattcggtattttgaa
acaaagacaatgagaggctacatttctgagcacttgagttggtatcaccatgtgcccgat
ttgatgagttggggatctggagctggcattgccattctagtcatatctggtgccgaaaat
gatcctctttctgatgaggagaaactgaagcaaatagtacaacgtgtttaccttataagg
ttcttaggtatccccaaaattgtgatagtgatcaacaaaatggatgatccgacttattca
ctaacaaggtttatggaactaaaaaaaagtgtggtagatgttttgaagcgtgctgggtac
gattataagaatgataccatgagtgttcctatatcaggaaaatcaggtttgaacatccaa
accatgacaagacatttgaggtattcaggtaaatgcctctttgagacattagctactatt
gatgtatcccaattggccatgagagtcacgtctgatcaaacatggtcccccaaggaggtt
gaggagttgggcctctttgaagaattgttcaagattgacacatccatagataaagaccaa
actgaccaaagtaaagcaacattatggtataggagagctaaaattgcagggaagcttcag
ttgtttaacgcatttcaagatgcggataaggcagtggaatgcaatttagatttgtctaat
aacccggaatacggggaagaagtcaatgatccttttctgtacaaaattaaaggggatctt
cattattcaagacaaagcttcgatcttgcccgtgaaaactatcttcacgcatatgaaatt
tttaataaacaaagatggaaaaaagccgttgaaaagttacaagaactgatatgtacttct
gaattactacaatctgaggaagaggaaaagcttaaaactcaaacgaagaagaaagggaag
aataaaggggagaagaaagaagagcttctagaggagaatgaagagcttaaagaggagaaa
aaagaagagcattttgacgagaagaaagatgatgagcttaaagaagagaaaaagaaagag
gagattggcgagaaaaaagatgatgattctattttgaagatatcaattgtcacggacttt
tcattggatgcaaaaccacaagacggtgtttattctgggtacaagattcgtgctgacatt
tccttgcctatttctataattcggtgttctgattatcagaaacagaattatcagaaacta
ttgtctttaggagacattggccctcatgtcttgagtattcatgatatgtatgatttcaca
attgaggaagagtcgtcaaccttttttgtagttcaacccatcaaatcggttgattactac
tactttttgaagtttgaggattttcgcaatcgtgtcaaaatcgatgaaggtgataaagaa
agtattctaactaaatggtggctttttatccaacctgaattccaaaaaaaaattcgggat
atagtctatggattgatttttttatttttgaaaagacaaaaatgtaaatcatccatgtat
gttatgaatgacgctgacggtaaagtgttgccatcaatggatcccaatgcaagtgatggt
gattaccttgatgatttggtgaaaaagatgaagtccattgtgaaacaaccacatcttggc
cacaagtctgcatcgaaatggcttccgattgatttggtccatcttttcaattccttttct
aaggagtgctgtatgttttaa
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