KEGG   Daucus carota (carrot): 108198919
Entry
108198919         CDS       T05350                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03020  RNA polymerase
dcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108198919
  09124 Replication and repair
   03420 Nucleotide excision repair
    108198919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108198919
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108198919
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108198919
  RNA polymerase III system
   RNA polymerase III
     108198919
  RNA polymerase I system
   RNA polymerase I
     108198919
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108198919
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 108198919
NCBI-ProteinID: XP_017222177
UniProt: A0AAF0XN44
LinkDB
Position
8:2722190..2725706
AA seq 206 aa
MTMTEEEVGRLYRIRRTVMQMLEDRGYLVVEAEKEMSKTQFLQKFGENFKREDLVICKSK
KNNPSDQIYVFYPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQSLTPFARSCQAEISSK
FQLEVFQEHELLVNIKEHVLVPEHQVLTPEEKKELLDRYTVRETQLPRIQLTDPVARYYG
LTRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgacgatgacagaggaggaagtgggaaggttgtataggattcgaaggacggtgatgcaa
atgttggaggataggggctatttggtggtcgaagctgagaaagagatgagtaagactcag
tttttgcaaaagtttggggagaatttcaagagagaagaccttgttatttgtaagtctaag
aagaataatccttctgatcagatttatgttttctatccggaagaagcaaaggttggtgta
aagactatgaagacgtacaccaaccgaatgaaatcagagaatgtttttcgagctatcttg
gttgtccagcaaagcctgactccctttgctcgttcatgccaagctgaaatatcatcaaag
ttccagttagaggttttccaggaacatgagttgttggtcaatatcaaagagcatgtactt
gttcctgagcaccaggtgcttacaccagaagaaaagaaggaattactggatagatatact
gtaagagaaacacagcttccccgtatccagcttactgatccagttgccagatactatggg
cttacacgagggcaagttgtaaaaatcatccgtccaagtgaaactgctggacgctatgtc
acttatagatatgttgtttga

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