Daucus carota (carrot): 108199081
Help
Entry
108199081 CDS
T05350
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00040
Pentose and glucuronate interconversions
dcr01100
Metabolic pathways
Module
dcr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108199081
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108199081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
108199081
NCBI-ProteinID:
XP_017222324
UniProt:
A0A175YQA7
LinkDB
All DBs
Position
8:28083867..28086340
Genome browser
AA seq
432 aa
AA seq
DB search
MAISSKASTRTSAFVPLVLCLALLACQIEGGLAKGHRRGGRPRLPGRGPVARPAPNPGTI
FNVLQFGAKPGSRLSQAQAFMKTWRAACDFDGIATVVVPPGVFTLAETVFQGPCRNPPLS
PITFQIQGTMKAVADPSEYSDKSWISFEHVDGLVLTGPGTIDGSGPDVWKYNDCHTNSNC
ELLPASLYLNDVKNAKIRGVTSVNSMGFHMHVTNSANIRINGVHIFAPADSPNTDGMHIS
RSYAVRVSKAVIRTGDDCISLGQGATNINVSRVTCGPGHGISVGSLGKLPDEQDVTGVNV
RNCTMAGTTNGIRIKTWPGSAPSKATGMLFSNIVMDNVHFPIIIDQNYGTHSDKPSLVKI
SDITYEDIKGTAASEVAVELDCSPGAPCDNVKFTNINLQPTINTMRLSATCANANVGYEG
MQFPPPCLPPHP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccatctcgagtaaagctagcacaagaacaagtgcatttgttccacttgttttgtgt
ctggctttgttggcttgtcagatcgagggtggccttgctaaaggtcaccgcagaggaggc
cgtcccaggcttcctggtcgtggtcctgttgctcgtcctgcccctaaccctggtactatt
tttaatgtcctgcagtttggagctaaacctggcagcagattatcacaggctcaggctttt
atgaaaacatggagagctgcatgtgattttgatgggatagcaacagttgtggttccccca
ggtgtcttcacacttgcagaaactgtatttcaagggccatgcagaaaccctcctctttct
cctataacatttcagattcaaggaaccatgaaagcggttgctgacccttcagagtactct
gacaaatcatggatttcatttgagcatgtagatggcttggtccttaccggcccaggtact
attgacggttcaggtcccgatgtttggaaatacaatgactgtcacactaatagtaactgc
gagcttcttcctgcttcgctgtacttgaacgatgtaaagaatgcaaagattaggggggtg
acatcagtgaacagcatgggattccacatgcatgttacaaatagtgcaaacatcaggata
aacggtgttcatatctttgcccctgcagatagccccaataccgatggcatgcacatcagc
agatcctatgctgtcagagtttcaaaggctgtcatcagaaccggggacgactgcatatct
cttggccaaggagcaaccaacataaacgtcagcagagtcacctgtggccctggacacggc
attagtgtgggaagcctggggaagctgccagatgaacaagacgtgacaggagtgaatgtg
aggaactgcaccatggcaggaactacaaatggtataagaattaagacatggcctggatca
gctccaagcaaagcaacaggcatgcttttcagcaacattgtaatggacaatgtccacttt
cccatcatcattgatcaaaactatggcacccattccgacaagccatcactcgtgaaaatc
agcgatatcacatatgaagatataaagggcacagcagcatcagaagtcgcggtggaatta
gactgcagccctggggcaccttgtgacaatgtaaagttcacaaacataaacttgcagcca
acaatcaacactatgagactgagtgctacttgtgccaatgctaacgtcggatacgaagga
atgcaatttcctccaccatgcctacctcctcatccgtaa
DBGET
integrated database retrieval system