Daucus carota (carrot): 108199193
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Entry
108199193 CDS
T05350
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108199193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108199193
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108199193
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GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108199193
NCBI-ProteinID:
XP_017222417
UniProt:
A0A175YRC9
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Position
8:complement(31343665..31347675)
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AA seq
621 aa
AA seq
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MHRCIPIPGPSDPVLDPRTRKIKFLNRFTVLSRGAALAIDPLFLFAITVSPSPKPCIYID
GTMLLFATLLRTFVDLLHGMHLWLKFRMAYVAKESLVSGSGVLVWDSRAVVKQYVGSPKG
FWFDLFVILPVPQAVYWLILPELLKQEKVKAVMTISHIIFLLQFFPKLYHSFYLMHGVKK
VTGYIFGTALWGLILNLIAYFLASHVSGGFWYSLSVQRIAECLKKQCHVSKQCETLAWTC
PREICYSSFTNSCLANSTMKGNFSTCMDQNGEFPFGNYAFALPLIVKNSNVVKILYSGLW
GIMSLSTMGSNFDLTSQTTEVSFAIVMVLAGLSLFTFLIGNIQVFFHSVTPRRRQMQLRY
CDIKWWMGRRQIPSELRRRVRHYEQERWKVMGGQDEMKLIKNMPDGLRRDIKRYLCLDLV
RKVPLFDNLDDLILDHICDRVIPMVYSANEKILKEGEPVQRMVFIVKGSVMRSQNITQDM
VTTTPIEPGGFIGDELIAWCLRIPFVDRFPPSSATFTCVEPVEAYGLNSDQLKHITNHFR
YTFSRGELKYKTRYYSSNWRSWAAVNIQFAWRRYWQRTRGDFINRGTGNAGSSDDASTSS
DQKLRHFAAMFMSLRPKDHLD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggtgcattccaatccccggtccgtccgaccccgttctcgatccccgaacccga
aaaataaaattcctaaaccgattcaccgtcctatctcgcggcgccgccttagccatcgac
cctttgttcctctttgccataacagtctctcctagtccgaagccatgcatttatattgac
ggaactatgttattattcgccaccttgttaagaacttttgtcgacttattacatggcatg
catctctggttgaagttccggatggcttacgtggccaaagagtcgctggtcagcggcagc
ggagtgctcgtgtgggattcacgcgccgtcgtgaagcagtacgtggggtcgcccaagggc
ttttggttcgacttgtttgtcatactcccggtgccgcaggctgtttactggttaatatta
ccagaactactaaaacaagaaaaggtaaaagctgtaatgactataagtcatataatcttc
ttgctgcaattcttccctaagctgtaccacagcttctaccttatgcatggagtgaagaag
gtcacaggctacattttcggcactgctttgtggggcttaatcctcaatctaatcgcttat
tttcttgcctcacatgtgtcggggggattctggtatagtctgtcagtgcaacgtatagca
gagtgcctgaagaaacaatgtcatgtaagcaaacaatgtgagacacttgcttggacttgc
ccgagagagatttgttacagcagctttacaaattcgtgtcttgccaattccaccatgaag
ggcaatttctcgacctgcatggaccaaaacggagagttcccctttgggaactatgccttt
gctctgcctcttattgttaagaactctaacgttgtcaaaattctctattctggtctctgg
ggaatcatgtctctcagcactatgggcagtaatttcgaccttacgagccagacaactgaa
gtaagttttgccatagtcatggtgctcgcaggcttgtcactctttacttttctaattggg
aatatccaggtgttttttcattctgtgacgcctagacggagacaaatgcaattgagatac
tgtgacatcaagtggtggatgggacggagacagataccatctgagctgaggcggagagtc
cggcattatgagcaagagagatggaaagttatgggaggccaagatgagatgaaactcatc
aaaaatatgccggatggactgagaagagatatcaagcgttatctctgcttggacttggtg
agaaaggtaccgctgtttgacaacttggatgaccttatcctcgaccatatttgtgaccgg
gttatacccatggtctactctgcaaatgaaaagattctgaaagaaggtgaaccagtacaa
cgcatggtgttcattgttaaaggttccgttatgagaagtcaaaatatcacacaggacatg
gtaacaaccactccaattgaacctggtggcttcattggagatgaacttattgcttggtgc
cttcgtataccatttgtagaccgtttcccaccttcatctgcgacattcacttgtgtggag
cctgttgaggcatatggtcttaattctgatcagcttaaacatataacgaatcattttcgt
tatacattctcacgtggtgaactcaagtacaaaacaaggtactactcttcaaattggagg
tcatgggctgctgtcaatatacaatttgcatggaggcgatactggcaaaggactagaggt
gatttcatcaatcgtggcacaggtaatgctggtagcagtgatgacgcaagcaccagcagt
gaccagaaactccgccattttgctgcaatgttcatgtcccttaggcctaaagaccacctc
gactaa
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