Daucus carota (carrot): 108199255
Help
Entry
108199255 CDS
T05350
Name
(RefSeq) mRNA export factor GLE1
KO
K18723
nucleoporin GLE1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108199255
03015 mRNA surveillance pathway
108199255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108199255
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108199255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
108199255
NCBI-ProteinID:
XP_017222476
LinkDB
All DBs
Position
8:complement(32600874..32609763)
Genome browser
AA seq
638 aa
AA seq
DB search
MGRTIALELKCARNVQGIAVDPQPDWSLDSLLLEINSIENKLNLSLSSRELLPGKGIKRN
PAFVMRVSDDEMENEECNADSDDSFDVESRALVVGTRFACDDDFSDSEDSEHELVLNSEP
CLMEKVGLVEGALSELTHEHRIVVMEEVRNQISTLEADLADKNEKFTSAIARVEKHSEAR
REMEKKLDLQYQRTVAEDLDKYLTDVQRRHEQRSQIEERRIRDDAAVEEAKRRQEEKHRQ
EKIKAEAEMQARLEAEKKRAEEVKALESQRAAKEAAEKLAAENSKKAAALAISPEATAQI
ERTQADKAEKAASGSFLKGAERALKMEELRSQIYKEVAAEAEALRRNMDLRSHEMQIARR
IRQISGTTESVRGKAMELVTLISNSTSPRSSTAIFAEKIVSQCVNPSGSFSKSVYAYAQV
VVLVTSKVPQTMDILLAELNRVCIYTVPKYMKYSESIFKTKEAYYKAIGFKEENGKLENR
DTYVERVRSCMKLYGALVQTEAEGVKNPHGIEEGWAWIARCLNALPANLYTAVSLQAFLE
MAGFALYRKYRSQFKKILNIISRNFITALKQQPDLANVVMNIQVYIDSKKFLEEPDGRRM
QSSLLSSEAVPETNYQGSYHHNSSNRDQYSYQSYRQHY
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaacaatcgcattggagctcaagtgtgctagaaatgtccaaggcatcgctgtg
gatccgcagcctgactggagtctcgattctctcttgctcgagatcaattctatcgaaaac
aagctcaatttatcgctttcttcgcgggaactcttgcctggaaaaggaattaaacgaaat
ccggcttttgttatgagagtgtcagacgatgagatggagaatgaagagtgtaatgctgac
agcgatgacagcttcgatgttgagagtcgagcgttagttgtgggcacacgctttgcatgt
gatgatgatttcagtgacagtgaggattccgagcatgagttggtgcttaatagcgaacca
tgtctgatggagaaagtgggattagtcgaaggtgcactatctgagctaacccatgaacat
cgtattgtggttatggaggaagttagaaaccaaatatcgaccctggaagcagatctggca
gataaaaatgagaagtttacttctgcaattgctcgtgtagaaaagcacagtgaagcacgc
agggaaatggagaaaaagcttgatttgcagtatcagcgtacagttgcagaagatcttgat
aagtacctgactgatgtacagagacggcatgaacaaagatctcaaatagaagaaagaaga
ataagagatgatgcggctgttgaagaggccaaaagacgtcaagaagaaaagcataggcag
gagaagataaaagcagaagcagagatgcaggctagacttgaagctgaaaaaaagagagca
gaagaagtgaaggctttggaatctcaacgagcagcaaaagaagcagcggagaagttagct
gctgaaaattcaaaaaaggctgctgcattagcaatatcacctgaagctactgcacaaata
gagagaactcaggctgataaagcagaaaaggctgcatcagggtcttttctcaaaggtgca
gaaagagctttgaaaatggaggaactaagatcacagatatacaaagaagttgctgctgaa
gctgaggcattgcgtagaaatatggatcttcgcagccatgaaatgcagatagctagacga
attagacaaattagtgggacaacagaaagtgttagaggaaaagcaatggaactcgtcaca
cttatctccaattcaacgagcccacgatccagtacagcaatttttgcagagaagatagta
tctcagtgtgtcaatccatctggaagcttcagtaaatctgtttatgcttatgctcaagta
gttgttcttgttacatcaaaggttccacaaaccatggacattcttcttgctgaattaaac
agggtttgcatatacactgttccgaaatatatgaaatactctgagtcaatattcaaaacc
aaagaagcttactacaaagccattggatttaaagaagagaatggaaagcttgaaaatcgt
gatacttatgtagaacgagtgaggtcatgtatgaagctatacggggcacttgttcagact
gaagctgaaggagtaaaaaacccacatggaatcgaagaaggctgggcatggatcgccaga
tgtttgaatgctcttccagccaatttatacactgctgtttcactgcaggcttttcttgaa
atggcaggcttcgctctatacagaaaatacagatcccagttcaagaagatactcaatatc
atttctcgaaacttcattactgcactcaaacaacaaccagatctagccaatgtagtcatg
aacatccaggtatacatagattcaaagaaattcctcgaggaacctgatggccgacgtatg
cagagttctttattatcaagtgaagctgttcccgaaacaaattaccaagggtcatatcat
cacaattcatcaaacagagatcagtatagctatcagtcatacagacaacattattag
DBGET
integrated database retrieval system