Daucus carota (carrot): 108199403
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Entry
108199403 CDS
T05350
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108199403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108199403
Spliceosome [BR:
dcr03041
]
Complex B
Other components
Prp19-related factors
108199403
Complex C
108199403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
108199403
NCBI-ProteinID:
XP_063938471
LinkDB
All DBs
Position
8:complement(3235173..3237918)
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AA seq
602 aa
AA seq
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MTALRELLPPAKSSGTTYYDHTSDPWFKQRYTAAEDEVSAVVKANSVPLYLNRDGFRPSR
PEHFGDGGAFPEILYAQYPLDMGRKKDAVSGQKTLPVTVDEHGRVTFDAIVKQNENASKI
VYSQHRDLVPKILKDEMEEDEEDIDERKEIEDKTTLETKMALEKIVNVRLSAAQPKNVTT
TSSDSKFIKYKPSHQSSAHNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKANGSPPVPVM
HSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSEA
LYLSEQKAREAVSMRSKVQKEMMLREKEKKEQELRALAQKARSERTGAAPPAASIPYDKS
MGDVDDMRGDNDNGRERAAPRETKEEREDRLRREKIREERRRERERERRLEAKDAAMGKK
SKITRDRDRDISEKVALGMASAGGARGGEVMYDTRLFNQEKGMDSGFGTEEQYNVYDKGL
FTAQNTLSTLYRPKKDADADTYGGADEQLDKIMKTDRFKPDKSFTGTSEKTGPRDRPVEF
EKEHEEADPFGLDQFLTEVKKGKKAMEKVGGSGTMKASAGSSMRDGYDGGSGRSRIGFEK
GR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacggctttgagagagcttcttccacctgcgaaatcgagtgggactacttattatgat
cacactagtgatccgtggtttaagcagaggtatactgcggctgaggatgaggtgtctgcg
gttgtgaaggctaattctgtgccgttgtatttgaacagggatgggtttaggccatcaagg
ccggagcattttggtgatgggggtgcttttccggaaatactttatgcacagtatcctctt
gatatgggtaggaaaaaggatgctgtttctggtcagaagacgttgcctgttactgttgat
gagcatggcagagttacgtttgatgctatagtgaaacagaatgagaatgcatctaaaatt
gtgtattcgcagcatagggatcttgtgccgaagatcttgaaagatgagatggaggaagac
gaggaagatattgatgaaagaaaagagattgaagataagaccacgttggagacgaagatg
gccctggagaagattgtgaatgtcaggttgagtgctgcacagccgaaaaacgttactaca
acatcttctgactcaaaatttatcaaatacaagccttcacatcagtcgtctgctcataat
tcgggtgccaaggaaaggattattaggatggttgagatgccagtggacccgttggagcca
ccaaagttcaagcacaagagggttcccaaggctaatggttctccccctgttcctgtaatg
cattctcctcctcgccctgtgactgtgaaggatcagcaggattggaaaatcccaccatgt
atatctaactggaagaatccaaagggttatacaatcccactagataagcgtttggctgca
gatggtaggggtcttcaggaggttcagattaatgacaattttgcaaagctctcggaagct
ctgtatctatcagaacagaaggcaagagaggctgtttccatgcgatctaaggttcaaaag
gaaatgatgttgcgggagaaggagaaaaaggaacaagaattgagagcattagctcagaaa
gctagatctgaaagaaccggtgctgctccaccagctgcctcaattccttatgacaagagt
atgggggatgttgatgacatgagaggagacaatgataatggaagagagagggctgcacca
agggagacaaaggaggaaagagaagatagactgaggagagagaagatccgtgaggagcgg
cgtcgtgagagggaaagagagagaagattagaagcaaaagatgctgcgatggggaagaaa
agtaagattaccagagatagagatcgtgatattagtgaaaaagttgcactcggaatggcg
tctgctggaggagcacgaggtggcgaagtcatgtatgacacgcgtttgttcaaccaggag
aaaggcatggactcaggctttggaactgaggagcaatacaacgtgtatgacaaggggttg
ttcactgcccagaatacactttcaactctttacaggccaaagaaagatgctgatgctgat
acatatggtggtgcagacgagcagctagacaagattatgaagactgatagattcaaacct
gacaagtcatttacaggcacatctgagaaaactggcccgagggacaggcctgtggaattt
gagaaggaacatgaagaagctgatccatttggtttggaccagtttttgactgaggtcaag
aagggtaagaaggccatggaaaaggttgggggcagtggtacaatgaaagctagtgcaggt
tcgtccatgcgagatggctatgatggcggttctggtcgcagtaggattggttttgaaaag
gggcggtaa
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