KEGG   Daucus carota (carrot): 108199412
Entry
108199412         CDS       T05350                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03420  Nucleotide excision repair
dcr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108199412
  09124 Replication and repair
   03420 Nucleotide excision repair
    108199412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108199412
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108199412
Ubiquitin system [BR:dcr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     108199412
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108199412
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108199412
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta_propel
Other DBs
NCBI-GeneID: 108199412
NCBI-ProteinID: XP_017222704
UniProt: A0AAF1BBQ9
LinkDB
Position
8:19444257..19458486
AA seq 1089 aa
MSTYNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTAQGLQPMLDVPIYG
RIATLELFRPHGETQDLLFIATERYKFCVLQWDPEAGEVITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL
YQDNKDARHVKTYEVALKDKDFIEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SASAFKAIPIRPAITRSYGRVDADGSRYLLGDHNGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEALERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAFKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPFDTFLVVS
FISETRILAMNIEDELEETEIEGFSSQVQTLFCHDAVYDQLVQVTSSSVRLVSSTSRELR
NEWKAPPGYSVNVATANSTQVLLAAGGGHLVYLEIGDGILNEVKHAQLEYDVSCLDINPI
GGNSSYSSLAAVGMWTDISVRIFSLPDLNLVTKEHLGGEIIPRSVLLCTFEGISYLLCAL
GDGHLLNFLLNLTTGQLTDRKKVSLGTQPITLRTFSSKSTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFALCSVKYNQSSAEDTEMHIIRLLDDQTFEFISSYSLDQFEYGCSILSCSFSDD
NNVYYCVGTAYVMPEENEPSKGRILVFLVEDGKLQLVAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMTAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYHL
GEFVNRFRHGSLVMRMPDSDVGQIPTCIFGTVNGVIGVVASLPQDQYSFLDKLQSNLRKV
IKGVGGLSHEQWRSYSSEKKTADAKNFLDGDLIESFLDLSRSKMEEVSKAMTVPVEELMK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagtacatacaactacgtagtgacggcgcacaagccgacgaatgttacacactcatgc
gtcggaaacttcactagtcctcaagagctcaatctcatcattgcaaaatgcactcggatt
gagattcatttacttactgcgcaaggtctgcagcccatgttggacgtgccgatatatgga
agaatcgcaactctagaactttttcgccctcatggtgaaactcaagatcttctattcatt
gctacagaaaggtataaattttgcgtacttcagtgggatccagaggcaggtgaagttatt
acgagggcaatgggggatgtctccgatcgtatagggcgtcctacggacaatggtcagatt
ggtataattgatccagattgcagactaattggactgcacctgtatgatgggttgtttaag
gtcattccattcgataataaaggccagttgaaggaagcatttaacataaggcttgaggaa
cttcaagttttggacatcaaatttctttatggttgtccaaagcctacaattgttgtactt
taccaggataacaaggatgctcgacatgttaaaacatacgaggtcgctttaaaagataaa
gacttcattgagggtccttggtcacagaacaaccttgataatggggcagatttactaata
cctgtgccaccacctctttgtggtgtcctaatcattggggaagaaactattgtgtactgc
agtgcctctgcattcaaagctatcccaatcagacctgccattacaagatcctatgggaga
gttgatgctgatggttcgaggtacttgctaggtgatcataatgggcttcttcacctactt
gttattacccatgaaaaggagaaagttactggtttgaaaattgagctccttggggaaact
tctattgcttcgacgatatcatatcttgataatgcgtttgtatatgttgggtcaagttat
ggagattcacagctcataaaactaaatctccagcctgatgcgaaaggttcttatgtagaa
gctttagaaagatatgtaaatttagggccaattgtggacttctgtgtggtagatttagag
aggcaaggtcaaggtcaagttgtaacttgctcaggagccttcaaagatggttcccttcga
atagtacgcaatggaattgggatcaatgaacaggcatcagtagaacttcaaggcattaaa
ggaatgtggtcattacgatcagctaccgatgatccatttgacacatttttggtggttagc
ttcatcagcgagactcgaattttggcaatgaatattgaggatgagttggaagagactgaa
atagaggggttttcctctcaagttcagacattgttctgccatgatgctgtttatgatcaa
ctcgtacaggttacctcaagctctgtaagactggtcagttcaacttctagggagcttcga
aatgagtggaaagctccaccaggctactcggtcaatgttgcaactgctaattccactcag
gttttattagctgctggcggtggccatttggtttacctggaaattggtgatgggatactg
aatgaagttaaacatgcacaactggagtatgatgtgtcatgtcttgacataaaccccatc
ggtggtaattccagctacagtagcctagctgcagttggaatgtggactgacataagtgtt
aggatcttttctcttcctgatctgaacctcgttaccaaggaacatttaggaggagagata
atacctcgttcagttcttttatgtacgtttgaagggatttcttacttgttatgtgcgctt
ggagatggacatcttcttaactttttgttgaacctgacaactggtcagctaacggatagg
aaaaaggtgtctctcgggacccaaccaattaccctacgaactttctcatcgaagagtact
acacatgtttttgctgcctcagacagaccaactgtcatttacagcagcaataagaaactg
ctctacagcaatgtgaacctaaaagaagttagtcatatgtgccctttcaactctgccgct
ttccctgacagccttgcaattgcaaaagaaggtgagttgacaataggcacgattgatgat
attcagaaacttcacattcgttcgatcccacttggggaacatgcacgtcgtatctgtcat
caagagcaatctcggacttttgccttgtgcagtgtaaagtacaaccagtctagtgcagaa
gacacagagatgcacattatacgcctgttagacgatcagacttttgagttcatatcaagt
tactcacttgaccagtttgaatatggttgctccattctgagttgctcgttctcggatgat
aataatgtctattattgcgttgggactgcatatgttatgccagaggagaacgaaccaagc
aaggggagaatactggtattcctagtcgaagatggaaagctgcagttggttgcagagaaa
gaaaccaagggtgctgtttactccctaaatgccttcaatggtaaactgcttgctgctatc
aatcaaaagattcagttatacaaatggatgcttcgtgatgatggtacccgtgagttgcaa
tctgaatgtgggcatcatggacatatacttgctctatatgtacaaactcgaggagatttt
attgttgttggcgacttgatgaaatctatatctctgctgatttataagcacgaggaaggt
gctattgaggagcgagcccgtgactacaatgctaattggatgacagctgtcgagattctc
gatgatgacatttaccttggcgctgagaataattttaaccttttcacagtcagaaagaac
agtgaaggtgccactgatgaagagcggagccgtcttgaggtggttggtgaataccatctt
ggcgagtttgttaatcggttcagacatggttcccttgtcatgcgaatgccagattcagat
gttggccagattccaacctgcatttttggaactgttaatggtgtcattggggtagttgcc
tcacttcctcaagatcagtacagtttcttagataagcttcagtctaatttgaggaaggta
ataaagggcgttggaggattgagtcatgaacaatggcgatcttattctagcgagaagaaa
actgcagatgctaaaaatttcctagatggggatctgatcgaatcatttcttgatcttagc
cgaagtaaaatggaagaggtttcaaaggctatgactgtaccggtggaggaacttatgaag
agagtagaggagttaaccaggttgcattaa

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