Daucus carota (carrot): 108199437
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Entry
108199437 CDS
T05350
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00500
Starch and sucrose metabolism
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108199437
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
108199437
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Gene cluster
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Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
RRM_5
Motif
Other DBs
NCBI-GeneID:
108199437
NCBI-ProteinID:
XP_017222730
UniProt:
A0AAF0XSS4
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Position
8:complement(25200156..25209217)
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AA seq
916 aa
AA seq
DB search
MSTMVALGPLVHHQIPSLPTLFTKTPLTSSLNYPHRAPLSVPTTSVSFKSSSYRPVVTAR
ATETDATTRTQTDQLADVVFTDTFPVRRAQKVEGKLIIKLDKGNSEGKWELMVGCTLPGK
WILHWGVNYVDDTGSEWDQPPIEMRPPDSIPVKDYAIETPLKISSKEKEVENLQTVKIGF
DSKSLIAAINFVLKDEETGAWYQHKGRDFKISVIDCLPGNRETIGSKKGSKKWPGALGQL
SSMILQSEGVDSDGVKSSNDPKGTSPRSSLKSFCEEHPIVKETLFDNAVKVSVSTCPETA
KKLLYMETDLPGDIVVHWGVCKDESKKWEIPAEPHPVKTTNFKNKALRTILQRKGEEGAG
GLFTMEQGLVGFLFVLKLNDDTWLNCMGNDFYVPLSTSSDLEKLSVKNQSEDSIQKVLTE
TVESDSSPISKKDGLSDPTISEYTDEIINEIRSLVTGISSEKKRKTKSKETQETILQEIE
KLAAEAYSIFRSPIPAFTESDVIEKIEPEAPVKICSGTGSGFEILCQGFNWESNKSGRWY
MELQEKAAELASLGFTVVWLPPPTESISPEGYMPKDLYNLNSRYGTVDELKILIEKFHEF
DIKVLGDAVLNHRCAHHQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAA
PNIDHSQDFVRKDLKEWLCWLRKDIGYDGWRLDYVRGFWGGYVKDYMEVTEPYFAVGEYW
DSLSYSYGEMDHNQDAHRQRIIDWINATSGTAGAFDVTTKGILHAALERCEYWRLSDEKG
KPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFSH
LNSEISALISIRTRNKINCRSTVNITKAERDVYAAIIDEKVAVKIGPGHYEPQHQHGNQN
WSLAREGRDYKVWEAS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccatggtcgctctcggacctctcgtccaccatcaaatccccagcctccctaca
ttatttaccaaaacgcccctcacatcttctctgaattaccctcacagggccccgctctcc
gttcccaccacttccgttagtttcaaatcttcttcttacaggcctgtcgtaaccgcacga
gctacggaaaccgatgcaacaacacgaactcaaactgatcagcttgctgacgttgttttt
acggatacttttccggttaggcgagctcaaaaggtagaaggaaagttaataatcaaacta
gataaaggcaacagtgaagggaaatgggagcttatggtaggatgtactcttccaggaaaa
tggattcttcattggggagttaattatgtggatgacacgggcagtgagtgggatcaacct
cccattgagatgagacccccggattccattcctgtcaaggactatgccattgagacacct
ttgaagatatcgtccaaggaaaaggaagtagaaaatctacaaacggtgaagattggattt
gatagtaagagtttaattgcagctataaattttgtgctaaaggatgaggaaactggagct
tggtatcagcacaaaggaagagactttaagatctctgttattgactgccttccgggtaac
agagaaactataggatctaaaaaaggttccaaaaaatggccaggggcattgggccagctc
tctagcatgatcctacaatcggaaggagttgattccgatggtgtaaagagctctaatgac
ccgaagggaactagtccgaggagttcccttaaaagtttctgcgaagaacatccaattgtt
aaagaaacattatttgataatgcggtgaaagtttctgtcagtacatgtccagagacagcc
aagaaacttctttacatggaaacggatctcccaggtgatattgttgttcactggggagtt
tgcaaagatgagagtaaaaaatgggaaatcccagctgagccacatccagtcaaaacaaca
aatttcaagaacaaggcccttcggactatcttgcagcgaaaaggcgaggaaggtgctggc
ggcttatttactatggaacaaggattagtaggatttctttttgtcttgaagttaaatgat
gacacatggttaaactgtatgggaaacgacttctatgtacccctttcaacttcaagtgac
ctggagaaactctctgtaaagaatcaatccgaagattcaatccaaaaggttttaactgaa
actgtagaatcagactcttcacccatatctaaaaaagatggattgtctgatccgacaatc
tcagaatacactgatgaaatcataaatgaaatcagaagtttggttactggaatttcttcc
gaaaagaaacggaaaactaaaagcaaagaaactcaagaaaccattcttcaagaaatcgaa
aagctggctgcagaagcttacagtatattcagaagtcctattccagcttttacagagagt
gatgtcatcgagaaaatagaaccagaagcacctgtaaaaatatgttcaggaactggttca
ggtttcgaaattttatgtcagggattcaactgggagtccaacaaatctggaagatggtac
atggaactacaagaaaaagctgccgaattagcatccctcggctttacagttgtttggtta
ccaccgccaacagagtccatctcacctgaaggctacatgccgaaagatttatacaactta
aattccaggtatggtactgttgatgaattgaagattcttattgaaaaatttcatgaattt
gacatcaaagttcttggggacgctgttttaaatcaccgttgtgcacatcatcagaatcag
aatggagtttggaatatatttggtgggcgtttaaattgggatgatcgggctgttgttgct
gatgatccacatttccagggaaggggaaacaaaagtagtggggataacttccacgctgct
ccaaatatcgaccactcacaagattttgtgagaaaggatctcaaagagtggttgtgttgg
ctcaggaaagacataggatatgatggatggagacttgactatgttaggggattttggggt
ggatatgtgaaagactacatggaggttactgagccatactttgctgtaggtgagtattgg
gattcactaagttactcatatggtgagatggatcacaaccaagatgcacaccggcagaga
attattgactggattaatgctacaagtgggactgctggtgcatttgatgttacgacaaaa
ggaattcttcatgctgcacttgaaagatgtgagtactggcggttatctgacgagaaggga
aaacctccaggggttgttggctggtggccttctcgtgcagttacttttatagagaatcat
gatactggttccacacagggtcattggagatttccaggtggaagagagatgcaaggttac
gcttacatattgactcaccctgggacaccatcagttttctatgatcacattttttctcac
cttaactcggaaatatcagcactcatttcgatcagaactagaaataagatcaactgccga
agtacagttaacatcaccaaagcagaaagggatgtttatgcagcaataattgatgagaaa
gtggccgtgaagattggaccaggtcattatgagcctcaacatcaacatgggaaccagaac
tggtctttagccagggaaggaagagattacaaggtctgggaagcatcataa
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