Daucus carota (carrot): 108199500
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Entry
108199500 CDS
T05350
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108199500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108199500
Spliceosome [BR:
dcr03041
]
Complex A
U1 snRNP components
U1 related factors
108199500
Complex B
108199500
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
108199500
NCBI-ProteinID:
XP_017222817
LinkDB
All DBs
Position
8:complement(32325811..32331552)
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AA seq
916 aa
AA seq
DB search
MAEIASSPEKPIDPIPQKPGPDNPISQPDPSSSAAPPSNPTPNLPQIAPPSIAPTGPLLQ
LPPSFRPPAPPVPLPLPPQFSPVQPPGVPPVPGSGTGSGPVPGGLVYAQLPNQRPPYMPM
PNGYLPLPPPGIPRYPSVYPVMARPVFPPRPLGIVGTNLTLARPPVPGVRGPPIIPPAIR
PGGIPSVTPTEKPQTTVYVGKIASTVDNDFILSVLQLCGPVKSWKRPQDPTSGTLKGYGF
CEFDSAEGILRAIRLLSKLNIDGQELMLNFNSATKEYLERYVQKKRENAKSSEKVGAEGG
QVTEKEERNGTGSEKGVPPESTQEESKDDNITDQKDQDVTKFGLVTDEDKEADRGALEKL
NGMIEERLKTHPLPPPPPSVDTTVFDTSTPEGHVGLKEGDMDVDIMKNDAADDKNEDDMR
SANRTPSEHDKQDTSSPHRSRKSDRSRDRERDAKREREKELERNELEREQERAKRDRERQ
YKTREEERRYRLRLDDWELREKQKDQMRRLEREKEEERADDRKYDIIDQEHESYDDYNKK
RKHRSSGEERKRRLREKEEDLADRLKEEEEIAEAKMREEEVLKKQKQEQEDAMRLLSASA
TKKTEEAVDEVAAECKEVIGRSPNNDMGHENRTTDRIQQNGTGDEICTNSIGAVDTQLSS
NVQSRKLGFGLVASGKRTTVPSVFNEEDEDAQKEKKMRPLIPIDYSHEELQAVQRGPSGS
LSPDLAAAAEFAKRITGVNSKEEKPEAEKDRSRRSHEKSSHRGQEWNAHGGNRTRDDYRK
DTVDHDKDQERQSDKVKTQENRKLLDAKQLIDTIPKTKDELFSYKINWAIYDKNQLHERM
RPWISKKITEFLGEEETSLVNYIVSTTQEHVNASEVLDRLQTILDDEAEMFVLKMWRMLI
FEIKKVETGLAARPKA
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaattgcatcatctcctgaaaaaccaattgacccgattcctcaaaaacccggc
ccggataaccccatctcgcaacccgacccatcttcttcggcagcccctccttcaaaccct
acccctaatttaccccaaattgcaccaccgtcaattgcgcccaccgggccgctgcttcag
ctacccccgtctttccggccaccagcgccgccggttccattgccgttaccgccgcagttt
tcgccggttcagcctcctggcgttccgcctgtacccggatccggaaccgggtcaggaccc
gtacccggtgggttggtttatgcacagctgcctaatcagaggcctccgtatatgccgatg
cctaatgggtacttgcccttgccgcctcctggaattcctcgttatcccagcgtctaccca
gtaatggctcgaccagtatttcctccacgtccgttgggaatagttggcaccaatcttaca
ctggcacgacctcctgttcctggagtgcgtggtccgccaataatccctcctgctatcaga
ccaggtggaattccaagtgttacacctacagagaagccgcaaacaacagtttatgtgggc
aagatagcatcaacagtagacaatgatttcatcctctcagtcctgcaactctgcgggcct
gtaaagagctggaaacgtcctcaagatccaacgtctgggactctgaaaggctatggattt
tgtgagttcgattctgcagaggggattcttcgtgcaattaggctgctgagcaaattaaat
attgatggacaagaactgatgttaaattttaactcagcaactaaagagtacttggagcga
tatgttcaaaagaaaagggaaaatgcaaaaagttctgaaaaagttggcgctgaaggtggt
caagtgactgagaaagaggaaagaaatggaacaggtagtgagaaaggtgttcctccagag
tccactcaagaggagtctaaagatgacaacattactgaccaaaaagatcaagatgttact
aagtttggtcttgtgactgatgaagacaaggaagctgaccgaggtgctttagagaaactc
aatggcatgattgaagaaagattgaagacgcatccattaccacccccacccccatcagtg
gataccactgtttttgatacttcaaccccagaaggtcatgttggattaaaggaaggcgac
atggatgtggatataatgaaaaatgatgcagcagatgacaaaaatgaggatgatatgaga
agtgcaaacagaactcctagtgagcatgataaacaagatacaagttcacctcacaggagc
agaaaaagtgataggagtagagatcgcgaacgggatgctaaaagggaaagggaaaaagaa
cttgaaaggaacgagttagaaagggaacaagaacgggctaaaagagacagagaaagacag
tacaagactagagaggaggagcgtcgatacaggctgcgtcttgatgattgggaacttcga
gaaaaacaaaaggatcaaatgcggaggctggagagagaaaaagaggaagaaagggcagat
gatcggaagtatgacattatagatcaagagcatgaaagttatgatgattataacaagaag
cggaaacacagaagtagtggggaggagaggaaaaggaggctgagagagaaggaagaggac
ttggctgacaggttaaaagaagaagaagaaattgctgaggccaagatgagagaggaagag
gttctaaaaaagcagaaacaagagcaagaagacgctatgaggcttttgtctgcttctgca
actaaaaaaactgaagaggctgttgatgaagtcgctgctgaatgcaaagaagtcattggt
cggtctcccaacaatgatatggggcatgaaaatcgtactactgacaggatccaacaaaat
ggcactggtgatgaaatatgtacaaactctattggtgcggtagatacacagctgagcagc
aatgttcaaagtagaaaattgggttttggtcttgtagcatctggaaaacgaaccacagtt
ccctctgttttcaatgaggaagatgaggatgcacagaaggagaaaaagatgcggcccctg
attcccattgactactcacatgaggaactacaggctgtccaacgtggtccttctgggtca
ttgtctccagacttggctgcagcagccgaatttgccaagcgcattacaggtgtcaactca
aaagaagagaagcctgaggctgaaaaggatagaagtagacgttcacatgaaaaatctagc
caccgtggccaagagtggaatgctcatgggggcaatcgcactagagatgattacagaaag
gatactgttgaccatgacaaggaccaggaacgacaatcagataaagtaaaaacacaagaa
aaccggaagcttcttgatgcaaagcagttgattgatacaattccgaagacaaaggatgag
ttgttctcgtataagatcaattgggccatttatgataagaatcaactacatgagaggatg
agaccatggatctctaagaaaattaccgagtttttgggtgaagaagaaacgtcactagta
aactacatcgtgtccaccacccaggaacacgtgaacgcatctgaggtgctagacagactt
cagactattcttgacgacgaagctgagatgtttgtgctgaagatgtggaggatgcttata
tttgaaatcaagaaagtagagacagggcttgctgcaaggccgaaggcttaa
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