Daucus carota (carrot): 108199544
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Entry
108199544 CDS
T05350
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00450
Selenocompound metabolism
dcr00970
Aminoacyl-tRNA biosynthesis
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108199544
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108199544
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108199544
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108199544
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
108199544
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108199544
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108199544
Prokaryotic type
Other AARSs
108199544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108199544
NCBI-ProteinID:
XP_017222896
UniProt:
A0AAF0XUQ8
LinkDB
All DBs
Position
8:complement(31580971..31588544)
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AA seq
809 aa
AA seq
DB search
MSNLSAAAAAGDDRKPIKLPISGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCR
LRGYNAIYVCGTDEYGTATETKALEENCTPKEICDKYHAIHKKVYEWFDIKFDEFGRTST
PQQTEVCQAIFTKLMENNWLSENTMQQLYCDTCKRFLADRLVEGSCPTQGCNYDSARGDQ
CEKCGKLLNPTELIDPKCKVCQNTPRIRDTDHLFLELPLLKDKLVEYINNMSVAGGWTQN
AIQATNAWLKEGLRQRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTAEWE
KWWKNPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKS
KGIGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNGELLNNLGNFVNRV
LSFIAKDQASGYGSIIPDAPGAESHLLTKNLGDKVGSCVEQYIEAMEKVKLKQGLKLAMS
ISGEGNAYLQESQFWKLYKEDKASCSIVLRTAAGLVYLLACLLEPFMPSFSAEVLKQLNM
PLETQVTLTDEKGDIERSKRPWELLPAGHKIGTPAPLFKELSDKDVESFRQKFAGSQADR
IVKAEAEAKQITEQLKKAKVSDGNVKKERTKKSASENKPKAAEQEISISRLDIRVGLITK
VQKHPDADSLYVEEIDVGEGQPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPATMRGIKSH
AMVLAVSNADHSKVELVDPPQSAPVGERLTFSGFEGDPDDVLNPKKKVWETIQPDLHTNK
ELIACYKDLPFTTSVGVCKVSSISDGSIR
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatctctccgccgccgccgctgccggcgatgaccggaaaccgatcaagctcccg
atttccggcaagcgcaacgttctcattactagcgccctgccgtacgtcaataacgtccct
catctcggcaatatcatcggatgtgtgttgagtgcggatgtgtttgctcggtactgtcgt
ctacgaggatacaatgcgatatacgtgtgtggaacggatgagtacgggacagctactgag
acgaaggcgctggaggagaactgcacgcctaaagagatttgtgacaaataccacgctatt
cacaaaaaggtgtacgaatggtttgacataaagtttgatgaatttggacgcacttcaacc
ccacagcagactgaggtctgccaagccatatttacaaaactgatggaaaacaattggctt
tcagaaaacacaatgcagcagctttactgtgatacatgcaaaaggtttttggctgaccga
cttgtagagggttcctgcccgacgcaaggctgcaactatgattctgcgcgaggagatcaa
tgtgaaaagtgtggcaaacttttaaaccctacagaactaatagacccaaaatgcaaggtc
tgtcaaaacacaccacgcatccgtgacacagatcacttgtttctcgaactccccttacta
aaggataaattagtagagtacattaacaatatgtcggtggctggagggtggactcaaaat
gctattcaagcaacaaatgcatggctaaaggaaggtctaagacaacggtgtataaccaga
gatttgaagtggggggttcctgttccacatgagaaatacaaggacaaggtattctatgtt
tggtttgacgctccaattggatatgtttctattacttcctgttacacggcagagtgggaa
aagtggtggaagaaccctgagaatgtagaattgtatcaatttatgggcaaggataatgta
ccttttcatactgttatgtttccatccacacttcttggaactggtgaaaattggaccctg
atgaaaactatcagcgttactgaatacttgaactatgaagcagggaagttctcaaagagt
aagggtataggagtttttggaaatgatgcaaaagacactaacattcctgtagaagtgtgg
agatattatttgctaactaatagaccagaggtatcagacacgttgtttacatgggcggac
ttgcaagcaaagttaaatggtgaattgttaaataatcttggaaatttcgtcaatcgtgtg
ttgagcttcatcgccaaagatcaagcttcaggatatggctccatcatccctgatgcacca
ggtgctgaatcacacctccttacaaaaaatttgggtgataaagttggtagctgtgtggag
caatatatagaagctatggagaaggtcaagctaaagcagggactgaagcttgcaatgagc
atttctggtgagggaaatgcatatctgcaagaaagccaattctggaagctttacaaagaa
gacaaggcttcctgttctatagttttaaggactgcagcaggactggtctatctgcttgct
tgcctgctagaaccatttatgccatccttctctgctgaggtacttaaacagctgaacatg
cctcttgaaacacaagttacacttacagacgaaaaaggagatattgagaggtctaaaaga
ccatgggagttgttacctgctggtcacaagattggaactcctgctccattatttaaggag
ctgtcggacaaggatgtggagtctttcaggcaaaagtttgctggaagccaagctgataga
attgtgaaagcagaagctgaagcaaaacaaattactgaacagctgaaaaaggcgaaagta
tcagatggaaatgtaaaaaaagaacgaaccaaaaaatctgcttccgaaaataaacccaag
gcagctgaacaagaaatctccataagtaggcttgatatccgtgttggtctcatcacaaag
gttcagaagcatcctgatgccgattccttatatgttgaagaaattgatgtgggcgagggt
caacctcgaacagttgtgagcggacttgttaaatttattcctcttgaagaaatgcagaac
cgtaaggtatgtgttctttgcaatttgaagcctgcaaccatgaggggtatcaagtcacat
gctatggttcttgctgtttcaaatgctgatcactctaaggttgaattggttgatccacca
caatctgcacctgttggagaaagattgaccttttctggctttgaaggcgaccctgatgac
gttcttaaccctaagaaaaaggtctgggaaaccattcagcctgacttgcacactaacaag
gaactgatagcctgctacaaagatttgcctttcactacatcagtcggagtttgcaaggtc
tcgtcaatatctgatggatcaatacgatag
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