Daucus carota (carrot): 108199626
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Entry
108199626 CDS
T05350
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00061
Fatty acid biosynthesis
dcr00071
Fatty acid degradation
dcr01100
Metabolic pathways
dcr01212
Fatty acid metabolism
dcr04146
Peroxisome
Module
dcr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108199626
00071 Fatty acid degradation
108199626
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108199626
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dcr01004
]
108199626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108199626
Enzymes [BR:
dcr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108199626
Lipid biosynthesis proteins [BR:
dcr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108199626
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of breast milk
108199626
Exosomal proteins of breast cancer cells
108199626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108199626
NCBI-ProteinID:
XP_017223022
LinkDB
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Position
8:complement(26960833..27000070)
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AA seq
697 aa
AA seq
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MVCMESSAERRIQAIQHHVCSDQYQTSLLRRNETAGEFVLAEQGYSVILPEKLETGKWNV
YRSVLSPMKLVSKFPNHPEIGTLHDNFTRSAKVFKDYKYMGTRVRVDGTVGEYEWMTYGE
AATARSAIGSGLVSLGIQKGSSVGIYFINRPEWMIVDHACSAYSNISVPLYDTLGPDAVK
FIVNHATVQAIFCVPQTLNTLLSFLSEMPSVRVIVVVGGIDDHIPSLPSTSGVQIISYSN
LMSQGQTNLHPFCAPKPSDTATICYTSGTTGTPKGVVLSHGNLIANVAGATFSMQFVPSD
IYISYLPLAHIYERFNQILVAYYGGSVGFYQGDNLKLLDDMVILRPTVFCSVPRVYNKIY
AGITNAVKASGGLKERLFNAAYNSKKQAILSGKNPSTMWERLVFKKIKEKLGGRLRFIVS
GASPLSPDVLEFLRVCFGQVVEGYGMTETACAITALDKDDVSIGHVGAPSPSCEVKPVDV
PEMNYTSHDQPHPRGEICVRGPIVFQGYYKDEVQTREVIDEDGWFHTGDIGLWLPGGRLK
IIDRKKNIFKLAQGEYIAPEKIENVYSKCKFVAQCFVYGDSINSSLVAVVSVDPDVFKSW
AVAEGFKSKNLEELCENPRARAAVLADMDAVGREAQLRGFEYAKVVALVLEPFSLENGLL
TPTFKIKRPQAKAYFAKVIADLYAEIAASDSSTRKLL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggtttgtatggagtcatctgctgaacgtcgaattcaagctatacaacaccacgtatgc
tccgaccaatatcaaacttcactgctccgccggaatgaaaccgccggcgagtttgtcctc
gcagagcagggatatagtgttatccttccggagaaactggagactggtaaatggaatgta
tacagatctgtcctatccccaatgaagcttgtgagtaaatttcccaatcatcctgaaatc
ggcaccttgcatgataattttacgcgttcagcaaaagttttcaaggattacaaatatatg
gggacacgagttcgagtggatggaacagttggagagtacgagtggatgacctatggtgaa
gcagctactgcgagatcagctattgggtctggtttagtgtctcttgggatacagaagggg
tcttctgtaggaatatattttatcaacagacctgagtggatgatagttgatcatgcctgt
tcagcctattccaacatatctgttcctttatacgacaccctgggtccagatgctgtcaaa
tttattgttaaccatgcaactgtgcaagctatattttgtgtgccacaaacattaaatact
ttgctaagcttcctgtctgagatgccttcggtgcgtgtgattgtggttgtgggagggata
gacgatcatattccatcacttccatcaacaagtggagttcaaattatttcatattcaaat
ctaatgagtcaggggcaaaccaatcttcatccattttgtgcaccgaaaccatctgataca
gctacaatatgttatacaagcggtacaactgggacaccaaagggagtcgtcttgtcccac
ggaaatttgatcgcaaatgttgctggtgcaacttttagtatgcaatttgtaccttctgat
atttacatatcatatctgcctttggcccacatttatgaaagatttaaccagattctggtg
gcatactatggaggctcagttggattctaccagggagacaatctgaaactactggatgat
atggtgattctaagacccactgtcttttgcagtgttccccgagtgtataataaaatatac
gctggcattacaaatgctgtgaaggcttctggtggtttaaaggagaggctattcaatgct
gcctacaattctaagaagcaagcaatactgagtggcaagaatccatctaccatgtgggaa
agattggtatttaaaaaaataaaggaaaaacttggaggacggcttcggtttattgtttca
ggtgcctcgcccttgtcacctgatgtcttggaatttctgagggtgtgctttggccaagta
gtagaaggatacggaatgacagagacagcttgtgctattactgccttggacaaggatgat
gtctcaattggccatgttggcgcccctagtccttcgtgtgaagttaagccagtggatgtt
ccagaaatgaattatacatcccacgatcagccccatccgcggggtgagatctgcgtacgg
ggccctattgtatttcaaggatattacaaagatgaagtgcagacgagagaagtcatcgat
gaagatggatggttccataccggagacatagggttgtggctccctggtggccgcttaaag
atcattgacaggaaaaagaacattttcaagttggcgcaaggggaatatatagctcctgag
aaaatcgaaaacgtatattcaaagtgcaagtttgttgcacaatgttttgtatatggtgac
agcatcaactcctctttggttgctgttgtctccgtagacccagacgtttttaaatcttgg
gctgttgcagaaggtttcaagtctaaaaacttagaagaattgtgcgaaaaccccagagca
agggctgctgtcctggctgacatggacgctgttggcagagaggcacagttaagaggcttt
gaatatgcaaaagtggtggcgttggttcttgaaccttttagtttggaaaatggtttgctg
acaccaacatttaagattaaaagacctcaggcgaaagcatacttcgccaaagtaatagct
gatctctatgcagaaatcgcagcctctgattcttctacgaggaagttattgtag
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