Daucus carota (carrot): 108199680
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Entry
108199680 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108199680
KO
K15082
DNA repair protein RAD7
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108199680
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
108199680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_RPS2
LRR_At1g61320_AtMIF1
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
108199680
NCBI-ProteinID:
XP_017223103
UniProt:
A0A175YKX4
LinkDB
All DBs
Position
8:complement(9034301..9040265)
Genome browser
AA seq
1060 aa
AA seq
DB search
MTVLRSREVKSVVEPVSKSNSPNSENLKQPRVSSIEPETPRNIGETQAADASNTATQMTG
GSTVSGTVRRSSRLALKACGSGAERSQSVSRVSSRKKRSVKLSGGGSGKSEGRVEMENAV
VEDSVDGDLVSKKGELGFEGESGVAVGDGMISEVSKGNGEGDLGGEVGCEEAVVDGIIGE
VSKGNGEGDLVGEVKCGEGVVDGMIGEVSKGNDEGDLGGEVECGEAVVEGSGGDTASNEV
VKKGNGKGKRKVGFEGLGEGEEDGRCLRLRSGKKVVMRGGVRGSVDNEELLDRVTAGCDD
VEEKGEGDCGEEETGAPGDLQSNLSERLNNEMMRNSDKGKGRLSRKDKGKGKLVDMVIEP
EAREAGVLDSENVLVKEDGSSYSINNISSSESDEDDVMKEGGSQISKPRIGNHVQGIDAI
ADRYRAIVGKRNKGPKGEEIDAWDELISKCVDSMKALLTMNEKVSPTQKHKGILNDELVG
PSGVGRRRLSRQQKGKWIAPETVVKSGTRKVAFSDGGNAEMQDGIPEVQRAERSNGDTVP
VQDGTQLQENDVGDHVARTRDRFRAQARRSASKFAYFSTVEEEQNNLAGAAETEMTQREI
NVEMEDWPGPFSTAMKIIRERGTNVNLQQKKGKETSQVMWVPKQEKDRKSSDVSVPMLLE
LCLRTLTKNADALTSLDYVPDVLRHKLSHMLCDMRRMNSHFLELLVRGSPAEIRIRDCSW
LSEEDFTKIFAEADINNLAVLQLDQCGRCMPDYILYSTLGRSPNCLPLLTTLSLKGACRL
SDAGLSTLLSSAPALRSVNLSQCSLLTVDGMNSIADSLGSALRELYIDDCESIDPISMLP
ALSKLEHLEVLSLAGLHAVCDDFICQLIALRGHNLKELVLADCVNLTDLSLKIISKSCTG
MRALDLSNLCKLTDIALGYLANGCQLIRTLKLRRNVFSDEALAAYLEISGASLEELSLNN
VGKVAQNTAVSLAKCSKYLQHLDISFCRNLSDEAVGLVADSCLSLKTLKLFGCTQITNLF
LDGHSNEQLQVVGLQLTPILENIKVPELVGPLRYSSVPSQ
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgacggttttgaggtctagagaagtgaaatcggttgtagaaccggtttctaaaagcaat
tcccctaattctgaaaacctaaaacaacctagggtttcgtcaattgagcccgaaacgcct
cgtaacattggcgaaacgcaggcggctgatgcgtctaacaccgctacgcaaatgacgggt
ggatctactgtgtctggtactgtgcggcggagtagccgcctggctttgaaagcttgtggt
agtggtgctgagaggagtcagtcggtttcgagggtttcgagtcgaaagaagaggagtgtt
aagttaagtggtggtgggagtggtaagagtgaggggcgagtggaaatggagaatgctgtt
gttgaggattcggtggatggtgatttggtgtctaagaagggggaattagggtttgaaggc
gaaagtggagtggcggttggtgatgggatgatcagtgaggtttccaaggggaatggtgag
ggggatttagggggtgaagttggatgtgaggaggcggttgttgatggaattatcggtgag
gtttccaaggggaatggcgagggggatttagtgggtgaagttaaatgtggggagggggtt
gttgatgggatgatcggtgaggtttccaaggggaatgatgagggggatttagggggtgaa
gttgaatgtggggaggcggttgttgagggttcgggtggtgatacggcgagcaatgaggtg
gtaaagaaggggaatgggaaagggaagaggaaggtagggtttgagggtctgggagagggt
gaggaagatggaaggtgtttgaggttgcggtcggggaagaaggttgtgatgcgtggtgga
gtgaggggttctgttgataacgaggaactgttggatagggttactgcaggatgtgatgat
gtggaggagaaaggtgaaggtgattgtggagaggaggaaactggggctccgggagatttg
cagtcgaatttaagtgaacgactaaacaatgagatgatgaggaacagtgataagggtaaa
gggagattaagcaggaaagataaagggaagggaaagttggttgatatggtgatcgaaccc
gaggcccgtgaagctggagttttagacagtgagaatgttttagtgaaagaggatggttca
tcatacagtataaataatataagttcatcagagagtgatgaggatgatgtaatgaaggag
ggtggttcacagatttcaaagcctcgtataggaaatcatgtacaaggaattgatgctata
gcagatagatatcgagctattgtcggaaaacgaaacaagggtcctaaaggtgaagaaatt
gatgcttgggatgaattgatttcaaaatgtgttgatagcatgaaggcattattaaccatg
aatgagaaagtaagccctactcagaagcataaagggatattaaatgatgagttggttggc
ccttctggcgtgggtagaaggagactgagcagacaacaaaaaggaaaatggatagcacct
gagactgtggtaaaatcggggactcgtaaagttgcattttcggatggtggcaatgctgaa
atgcaggatggtattccagaggtccagagagctgaaagatcaaatggtgacactgtccca
gtgcaggatggtacacagctacaggagaatgatgtaggagatcatgttgcaagaaccagg
gataggtttcgagctcaagccagaagaagtgcttcaaaatttgcttatttctccactgtg
gaggaagaacaaaacaatcttgcaggtgcggctgaaacagaaatgacacaaagagaaata
aatgtcgaaatggaagactggcctggtccgttctcaactgctatgaagatcattcgggaa
cgaggaacgaatgtgaacttgcaacagaagaaagggaaagaaacttcacaagttatgtgg
gttcccaaacaggagaaggatcgtaagagttctgatgtgtctgttcctatgttgctagaa
ctatgcttgagaactcttaccaaaaatgcagatgctttaacatctttggactacgttccc
gatgtattaaggcataaacttagccatatgctttgtgatatgcgaagaatgaacagtcat
tttcttgaactccttgtgagagggtctcccgcagagatacgcataagagattgctcttgg
ctatcagaagaagattttacaaagatttttgcagaggctgacatcaataacttagcggtg
cttcaacttgatcaatgtggacgttgtatgccagattatatcctatattcgacattaggc
cgatcaccaaattgcctgcccttgttaactactttatcgttgaagggtgcatgccgtctt
tcagatgctgggctgagcacacttttatcttctgcacctgctttgagatctgtaaatctc
agtcagtgctctttgctcaccgttgatgggatgaacagcatagctgattcattaggatca
gctttgcgagaattatacatagatgactgtgaaagtatagatcctatttcaatgttgcct
gcactgtcaaagctggaacatttggaagtgttatctcttgctgggctccatgctgtttgt
gatgattttatttgtcaattaattgctttgcgcggacacaatctgaaagagctcgttttg
gcagactgcgtgaatttgactgatctttctcttaaaatcatctccaaaagctgtactggg
atgagggcattagatttgagtaacttatgcaagctgactgatattgcgcttggatatctt
gctaatggatgtcagcttattagaacattaaaactccgtcgcaatgtcttcagtgatgaa
gctcttgctgcttatctggaaattagtggagcgtcgttagaggaattgtcgctcaataat
gtcggcaaggtagcccaaaacactgccgtatcactcgccaaatgctcaaagtacttgcag
catttggatatttcgttctgccggaatttgtcagatgaagctgtaggacttgttgcagat
agctgcttgtccttgaaaacattgaaattgtttgggtgcacccagatcacaaatcttttt
ttggatggccactcaaatgagcagctacaagttgttggattgcagttgacacccatatta
gaaaatatcaaggtacctgaacttgtaggaccattacggtactcttcagtgccttctcag
taa
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