Daucus carota (carrot): 108199763
Help
Entry
108199763 CDS
T05350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108199763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108199763
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108199763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
108199763
NCBI-ProteinID:
XP_017223217
LinkDB
All DBs
Position
8:20411973..20416576
Genome browser
AA seq
478 aa
AA seq
DB search
MEMEPGKLFIGGISWDTNEDRLKEYFQTFGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
EGVVKDKHMIDGRTVEAKKAVPRDDQQTPNRISGSVQGSPVPIRTKKIFVGGLASTVTES
DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLLRTFHELNGKMVEVKR
AVPKELSPGSIRSQLSGQNYGLSRVSNLLNAYTQGYSPSPGGGYGLRMDGRFSPAAVGRS
GYSSLSSGYGLGSYFEPGLGSNLEGSAHLGSNISYARGLDAFQNGSPNRYGSPVGHGIAG
TGSVLNTMNWNTWGDGGLNYTKNLTNSAEFMGSGSANTGLVNALGNIGAIWGSSPISGQD
RGIGSAFSNENINYGNAENSFELGGLGYARNTRGNMAPSPISSFGAANSAYEGSFGNFHG
SGSVFGDTTWRSASPDLEGPRTFDYDLRTAVSEVTPKNAVGYVGGYSVTNRANRGIAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaacctgggaagttgttcattggtggaatttcatgggacactaatgaagat
cgtctcaaggaatattttcaaacgtttggtgaagtggtggaagctgtgattatgaaggat
cgaacaacgggtcgtgctcgtgggttcggttttgttgtttttgctgatcctgctgttgcg
gaaggggtggttaaagataaacatatgatagatggcagaactgtggaagcaaagaaggct
gttcctagggatgatcagcaaactccgaataggatcagtggcagtgttcaaggttcgccg
gtacctatccgcaccaagaagatatttgtaggaggtttggcatccacagtcactgagagt
gactttaagaattacttcgatcaatttgggacaataacggatgttgtggtaatgtatgat
cacaacacccagaggcccagagggtttggattcatcacatatgattcggaggaagcagta
gatagggtgctgcttagaactttccatgagctcaatggtaaaatggtcgaggttaagcgg
gctgttcccaaagaattatctccaggatcaattaggagtcagctaagcgggcaaaactat
ggtctgagcagagtaagcaatctacttaatgcctacactcaggggtatagtccaagccca
ggtggaggctatggactaagaatggatggtaggtttagtccagctgctgttggccgcagc
ggatattcttcattgagttctggctatggtctgggatcatattttgaaccaggtttggga
tcaaatcttgaaggatctgcgcaccttggttctaatattagttatgctcgtggtttggat
gctttccaaaacgggagtccaaataggtacggaagtccagttgggcacggcatagctgga
accggctctgtgttgaacacaatgaactggaacacatggggagatggtggtcttaattat
accaaaaacttaactaattctgctgaatttatgggttctggtagcgcgaatactgggtta
gtcaatgcactaggtaatattggagccatttggggttcctcgcccatatcaggtcaggac
agaggcatcggttctgcttttagcaatgagaacattaactatggcaatgctgagaacagt
ttcgaattaggtggattgggttatgcaaggaacactagaggcaatatggctccatctcca
atatcatcttttggtgctgcaaatagtgcttatgaaggttcctttggtaactttcatggc
agtggttcagtctttggggacacgacttggcgttcagcatctcctgatctcgagggccct
cgaacttttgattatgatctccggactgcagtttctgaggtcacacctaaaaatgctgtt
ggttatgttggtggttatagtgttactaatagagcaaatagaggaattgctacctag
DBGET
integrated database retrieval system
