Daucus carota (carrot): 108199770
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Entry
108199770 CDS
T05350
Name
(RefSeq) protein argonaute 10 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108199770
03036 Chromosome and associated proteins [BR:
dcr03036
]
108199770
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108199770
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108199770
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108199770
microRNA pathway
RISC loading complex
108199770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108199770
NCBI-ProteinID:
XP_017223224
LinkDB
All DBs
Position
8:26368211..26377784
Genome browser
AA seq
992 aa
AA seq
DB search
MPIRQLKEGSEQHLVIKPHLQNSVNQVRKQLKAARNGKGPPGQENQNAKPDNQSSPPSKS
RGRRRGRGGRKSDQGDALMRPSTRPCTAEYAPVVQVSAQSSAANEVNNSNSNEGTVCEVM
RDFPSSSKSLSFAQRPGYGQLGTKCIVKANHFFAELPEKDLNHYDVTITPEVSSRNMNRA
IMAELVKLYKESDLGMRLPAYDGRKSLYTAGELPFAWKEFNIKLTDEDDGVNGPNRRVRE
YKVVIKFAARANLHHLGQFLAGKRADAPQEALQILDIVLRELSNKRYCPVGRSFFSPNIR
KPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEALPVIEFVAQLLGKDVLTKTL
SDSDRVKVKKALRGLKVEVTHRGHIRRKYRVSGITSQPTRELVFPVDDNSNMKSVVEYFQ
EMYGFTIQHTHLPCLQVGNQRKANYLPLEACKIVEGQRYTKRLNEKQITALLKVTCQRPR
DREHDILQTVQHNAYDQDPYAKEFGINISEKLASVEARVLPAPWLKYHENGKEKDCLPQV
GQWNMMNKKMINGMTVSRWACINFSRSVQENVARGFCSELARMCQVSGMEFSPEPVIPIY
TAWPDDVEKALKHVYHACTNKLKGKELELLLVILPDNNGSLYGDLKRICETDLGLISQCC
LTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENG
EDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRELL
VSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKR
HHTRLFANNHRDRSSTDKSGNVLPGTIVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVL
WDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPELQENGCGV
GQGTKNTRGSGESGVRPLPALKENVKRVMFYC
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgccgattaggcagcttaaagaagggtcagagcagcacttagtgatcaaaccccactta
caaaactcggtgaatcaggttcgcaagcaacttaaagctgctcgaaatggaaaaggccca
cctgggcaagaaaaccagaatgcaaaacccgataaccaatcttcacccccctccaaaagt
agaggaaggagaagaggaagaggtggtcggaaatcagatcaaggtgatgctttaatgcgt
cccagcacgcggccttgcacggcggagtatgctccggtggttcaggtttcagctcagtct
agtgccgctaatgaagtaaataatagtaatagtaatgaaggcacagtgtgtgaagtaatg
agggattttccttcttcaagtaagtctttgagttttgctcaaagacctgggtatgggcag
cttggcacaaaatgtattgtcaaggctaaccatttctttgcagagttaccagagaaagac
ttgaatcactatgatgttaccatcacccctgaggtgtcatccaggaatatgaacagagct
ataatggcagaactcgtgaaactgtataaagaatctgacttggggatgagattacccgct
tatgatggcagaaagagtctgtacactgctggtgagcttccatttgcatggaaggagttc
aatatcaaacttacagacgaagatgatggagtcaatggtcccaacagaagggtgcgggag
tacaaagtggtgattaaatttgctgcaagggcgaatttgcatcatctgggccaatttttg
gctggcaagcgtgcagatgctccacaggaagctcttcaaatacttgacattgtattaagg
gaactatcaaacaagaggtattgccctgtgggaagatctttcttttctcctaacataagg
aaaccacaacggcttggtgagggcttagagtcatggtgtggattttatcaaagtataagg
cctacccaaatgggcttgtccctaaatattgatatggcatcagctgcttttattgaggcc
cttcctgttatagagtttgttgcacagcttcttggcaaagatgtgctaacgaaaactttg
tctgattctgatcgtgtaaaggtaaaaaaggcccttagaggcttgaaagttgaagtaaca
cataggggtcatatacgaaggaagtatcgggtttcaggaataacatctcaacccacaaga
gaattagtgtttcctgttgatgacaactcaaatatgaagtcggttgttgaatactttcaa
gagatgtatggcttcacgattcagcatacgcatcttccctgtcttcaagttggaaaccag
agaaaggcaaattatttgccattggaggcttgcaagatagtcgaaggtcaaagatacaca
aaaaggttgaatgagaagcaaattactgctcttctgaaagtaacatgccaaagaccaaga
gatcgagagcacgacattttgcagacggttcaacacaatgcttatgatcaagacccctat
gcaaaggaatttggcatcaatattagtgaaaagcttgcttctgttgaggctcgagttctc
cctgctccatggctaaaatatcacgaaaatgggaaggagaaggactgtttgccacaagtt
ggtcagtggaacatgatgaacaagaaaatgattaatggtatgactgttagtcggtgggca
tgcatcaacttctcacgaagtgtgcaagaaaatgttgctcgtggattttgtagtgaactg
gctcgtatgtgtcaagtttctggaatggaattcagccctgaacctgtaataccaatctac
acagcctggcctgacgatgtagagaaagctttgaagcatgtttaccatgcctgtacgaac
aaattaaaggggaaagaattagagcttctgttagtcattctgccagacaacaacgggtca
ctgtatggagatttgaaacgaatatgtgaaactgatcttggcttgatttctcaatgctgt
ctgacaaagcatgtctttaagattagcaagcaatatttggcaaatgtgtcactgaagata
aatgttaagatgggtggtagaaatactgttcttctagatgctattagctgcagaatacca
ctagtcagtgacataccaacaattatatttggagcagacgtgacccatccggagaatgga
gaagattcgagtccctcgatagctgctgtagtagcttcccaggattggcctgaagtcaca
aaatatgcaggtttagtttgcgctcaagctcatagacaagagcttatacaggacttgtac
aaaacatggcaagatcctgtacggggtacagttagtggtggcatgatcagagaacttttg
gtttccttcaggaaggcaactgggcagaaaccattacgcataatattttacagggatggt
gtgagtgaaggccaattttatcaagttctactttatgagttggatgctatacggaaggcc
tgtgcttctttggaacccaattatcaacctcctgtgactttcattgtggtgcaaaaacga
catcatacaaggttattcgcaaacaaccacagggatcgaagcagcactgataaaagtgga
aatgttttgccaggaaccatagttgatacgaagatctgccatccaacagaatttgatttt
tatctctgcagccatgctggtattcagggcaccagtcggccagcacattaccatgttctt
tgggatgaaaacaattttacagctgatgggattcagtcgttaacaaacaacctttgctac
acatatgcaaggtgcacgcggtccgtgtctgttgttcctccggcatattatgcacattta
gctgcatttcgagccagattctacatggaaccagaactgcaggagaatggctgtggtgtt
ggtcaagggacgaagaatacaagaggctctggagagtcgggagtgcgtccattacctgcc
ctcaaggagaatgtgaaaagagtaatgttttattgttag
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