Daucus carota (carrot): 108199813
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Entry
108199813 CDS
T05350
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108199813
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108199813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF12
PAN2_N
PROPPIN
VPS8_N
Motif
Other DBs
NCBI-GeneID:
108199813
NCBI-ProteinID:
XP_017223289
UniProt:
A0A175YQ22
LinkDB
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Position
8:complement(29500262..29511347)
Genome browser
AA seq
804 aa
AA seq
DB search
MSTAKRAYKLQEFVAHSSSVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSTEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
EFKSHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRSMTFNPDG
RTLLCGLHESLKVFSWEPIRSHDSVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDIS
RVEPYAIVTPRSNSIQGTKANVSGSISVLTENTAKTGTARLSVSQNSDSVMKETKAFARL
SVSQNSEPVQKESKSFTSTGTTPSTPQRVIPNAGPKPSTVGSMGIPAATAPNVGSKTSSV
SSLSIPAVTAPRKNLPKIHATPNTSFFNKSDGVSVVVPRNSARLDQAAELRREGISGKPS
LTMQSRPSAFRKYATTKDDPERASVSGQSETEMFTTNGFSGHDKSTYPSVQTSSMGTSAS
TLKDNRSSIHSKFQMNPVTEPPSSYPHESYETRTHRIDRDASSMENQRGVRTRSLVANWE
KKDKAPGPESNPSGAVSSVNTLPINVEMEPGNEEDTISALMEPHNKFVGSLQSRLAKLEM
VHKYWERNDIKGAIGMTQKMSDNAVLADVVSILTEKPDIVTLDICTCVLPLLASLLESEM
DWHQGVSLELLIKLVRVFGSVIYSSLSASSSVGVDIEAEQRLERCNLCYVELERVKHCLP
VLTRKGGTIAKSAHELSLALQEVS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgctaaacgtgcttacaagctgcaggaatttgtagctcactcttcgagcgta
aattgtctcaagattgggaggaagacatcgagggttttagtaacaggaggagaggatcac
aaggttaatctttgggcgattggcaaaccaaatgccattttgagcttgtcaggtcattct
agcggtattgattctgttagttttgattctactgaagtgttggtagctgccggggcagcg
agtggtacaattaagctatgggatcttgaagaggcaaaaattgttcgcacccttactggt
catcgatcgaactgtatatccttggacttccacccatttggtgaattttttgcttccgga
tcactggacactaatctaaagatatgggatattaggcggaaggggtgtattcacacctac
aagggccacacaagaggggtaaatgcaatcagatttaccccagatggtcgttgggtcgta
tctggtggagaggacaatacagtgaagctctgggacctaactgccggaaagctcttacat
gaattcaagagtcatgaaggccagattcaatgcatagattttcatcctcatgagttctta
cttgcgacaggttcagctgacagaactgttaaattttgggaccttgaaacctttgagcta
ataggatcagctggtccggagacctctggagtacgctctatgactttcaatcctgatgga
agaacccttctttgcggtttgcatgaaagtttgaaggttttttcatgggaaccaattaga
agtcatgatagtgtggatgttggatggtccagattatctgatctgaatattcacgagggg
aagctacttggttgttcttacaatcaaagttgtgttggagtatgggttgtggacatatcg
cgcgttgaaccatatgcaattgttactcctcgatcaaacagtatccaagggacaaaagct
aatgttagtgggagcatatcagttctgacagagaatactgcaaagactggcactgcgagg
ctgtctgtttcacaaaactctgattctgtaatgaaggaaacaaaagcttttgctaggctt
tcagtgtcacagaactccgagcccgtccaaaaggagtcgaaatcttttacatccacggga
actacacccagtacacctcaacgagtgattccaaatgctggaccaaagccaagtacagtt
ggttcgatgggcattcctgccgcaacagcaccaaatgttgggtcaaaaacatcttcagtt
agttcattgagcattcctgctgtaacagctccaaggaaaaatttgccaaagatccatgca
acacccaacacttcattttttaacaagtcggatggcgtatcggtagtagttcctagaaac
agtgcaagattggaccaggcagctgaattaaggcgcgaaggaatttctggaaaaccgtcc
cttaccatgcagtcaagaccatcagcttttcggaaatatgcaactactaaagatgatcca
gaaagggccagtgtttcaggacagtctgaaactgaaatgttcacaaccaatgggtttagt
gggcatgataaaagtacttatccttctgttcagacatcatcaatgggaacttctgcaagt
actttaaaagataatagatcttctatacattctaaatttcagatgaatccggtgacagag
ccacctagcagctatccgcatgaaagctatgagactcgaacgcatagaatagatcgagat
gcttcttctatggaaaatcaacgaggagtacggacacgttctcttgttgcaaactgggag
aagaaagataaagctcccggtcctgagagcaatccatctggtgccgtttcttctgttaac
acactcccaattaatgtggaaatggagcctggcaacgaggaagatactatttcagctttg
atggaaccacataataaatttgttggctcattgcagtctcgtctagcaaaattggagatg
gtccacaaatactgggaaagaaatgatattaaaggggccattggaatgacgcagaagatg
tctgataatgctgtccttgctgatgttgttagtatattgacggaaaaacctgacattgtt
acactggacatatgcacctgtgttttgccactccttgcaagccttcttgaaagtgaaatg
gattggcatcaaggagtttcactggaattgctgataaagcttgtcagggtctttggttca
gtgatctattcttctttatctgcatcatcatccgttggtgttgatattgaggcagaacaa
aggcttgaacgttgcaatttatgctatgtcgagcttgaaagggtcaagcactgtctacct
gtcctaaccagaaaagggggaaccatagccaaatctgcccatgaattgagtcttgcactt
caagaagtctcataa
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integrated database retrieval system
