KEGG   Daucus carota (carrot): 108199813
Entry
108199813         CDS       T05350                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dcr04812]
    108199813
Cytoskeleton proteins [BR:dcr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     108199813
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Katanin_con80 Beta-prop_THOC3 WD40_Gbeta WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SCAP DSE1_N ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_NOL10_N ASA1 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_IFT140_1st eIF2A PAC11 CFAP251_N Beta-prop_Vps41 TRM82_WD Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_ACSF4 PAN2_N PROPPIN
Other DBs
NCBI-GeneID: 108199813
NCBI-ProteinID: XP_017223289
UniProt: A0A175YQ22
LinkDB
Position
8:complement(29500262..29511347)
AA seq 804 aa
MSTAKRAYKLQEFVAHSSSVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSTEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
EFKSHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRSMTFNPDG
RTLLCGLHESLKVFSWEPIRSHDSVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDIS
RVEPYAIVTPRSNSIQGTKANVSGSISVLTENTAKTGTARLSVSQNSDSVMKETKAFARL
SVSQNSEPVQKESKSFTSTGTTPSTPQRVIPNAGPKPSTVGSMGIPAATAPNVGSKTSSV
SSLSIPAVTAPRKNLPKIHATPNTSFFNKSDGVSVVVPRNSARLDQAAELRREGISGKPS
LTMQSRPSAFRKYATTKDDPERASVSGQSETEMFTTNGFSGHDKSTYPSVQTSSMGTSAS
TLKDNRSSIHSKFQMNPVTEPPSSYPHESYETRTHRIDRDASSMENQRGVRTRSLVANWE
KKDKAPGPESNPSGAVSSVNTLPINVEMEPGNEEDTISALMEPHNKFVGSLQSRLAKLEM
VHKYWERNDIKGAIGMTQKMSDNAVLADVVSILTEKPDIVTLDICTCVLPLLASLLESEM
DWHQGVSLELLIKLVRVFGSVIYSSLSASSSVGVDIEAEQRLERCNLCYVELERVKHCLP
VLTRKGGTIAKSAHELSLALQEVS
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtccactgctaaacgtgcttacaagctgcaggaatttgtagctcactcttcgagcgta
aattgtctcaagattgggaggaagacatcgagggttttagtaacaggaggagaggatcac
aaggttaatctttgggcgattggcaaaccaaatgccattttgagcttgtcaggtcattct
agcggtattgattctgttagttttgattctactgaagtgttggtagctgccggggcagcg
agtggtacaattaagctatgggatcttgaagaggcaaaaattgttcgcacccttactggt
catcgatcgaactgtatatccttggacttccacccatttggtgaattttttgcttccgga
tcactggacactaatctaaagatatgggatattaggcggaaggggtgtattcacacctac
aagggccacacaagaggggtaaatgcaatcagatttaccccagatggtcgttgggtcgta
tctggtggagaggacaatacagtgaagctctgggacctaactgccggaaagctcttacat
gaattcaagagtcatgaaggccagattcaatgcatagattttcatcctcatgagttctta
cttgcgacaggttcagctgacagaactgttaaattttgggaccttgaaacctttgagcta
ataggatcagctggtccggagacctctggagtacgctctatgactttcaatcctgatgga
agaacccttctttgcggtttgcatgaaagtttgaaggttttttcatgggaaccaattaga
agtcatgatagtgtggatgttggatggtccagattatctgatctgaatattcacgagggg
aagctacttggttgttcttacaatcaaagttgtgttggagtatgggttgtggacatatcg
cgcgttgaaccatatgcaattgttactcctcgatcaaacagtatccaagggacaaaagct
aatgttagtgggagcatatcagttctgacagagaatactgcaaagactggcactgcgagg
ctgtctgtttcacaaaactctgattctgtaatgaaggaaacaaaagcttttgctaggctt
tcagtgtcacagaactccgagcccgtccaaaaggagtcgaaatcttttacatccacggga
actacacccagtacacctcaacgagtgattccaaatgctggaccaaagccaagtacagtt
ggttcgatgggcattcctgccgcaacagcaccaaatgttgggtcaaaaacatcttcagtt
agttcattgagcattcctgctgtaacagctccaaggaaaaatttgccaaagatccatgca
acacccaacacttcattttttaacaagtcggatggcgtatcggtagtagttcctagaaac
agtgcaagattggaccaggcagctgaattaaggcgcgaaggaatttctggaaaaccgtcc
cttaccatgcagtcaagaccatcagcttttcggaaatatgcaactactaaagatgatcca
gaaagggccagtgtttcaggacagtctgaaactgaaatgttcacaaccaatgggtttagt
gggcatgataaaagtacttatccttctgttcagacatcatcaatgggaacttctgcaagt
actttaaaagataatagatcttctatacattctaaatttcagatgaatccggtgacagag
ccacctagcagctatccgcatgaaagctatgagactcgaacgcatagaatagatcgagat
gcttcttctatggaaaatcaacgaggagtacggacacgttctcttgttgcaaactgggag
aagaaagataaagctcccggtcctgagagcaatccatctggtgccgtttcttctgttaac
acactcccaattaatgtggaaatggagcctggcaacgaggaagatactatttcagctttg
atggaaccacataataaatttgttggctcattgcagtctcgtctagcaaaattggagatg
gtccacaaatactgggaaagaaatgatattaaaggggccattggaatgacgcagaagatg
tctgataatgctgtccttgctgatgttgttagtatattgacggaaaaacctgacattgtt
acactggacatatgcacctgtgttttgccactccttgcaagccttcttgaaagtgaaatg
gattggcatcaaggagtttcactggaattgctgataaagcttgtcagggtctttggttca
gtgatctattcttctttatctgcatcatcatccgttggtgttgatattgaggcagaacaa
aggcttgaacgttgcaatttatgctatgtcgagcttgaaagggtcaagcactgtctacct
gtcctaaccagaaaagggggaaccatagccaaatctgcccatgaattgagtcttgcactt
caagaagtctcataa

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