Daucus carota (carrot): 108199929
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Entry
108199929 CDS
T05350
Name
(RefSeq) cellulose synthase-like protein D3
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108199929
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108199929
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Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Glyco_tranf_2_3
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108199929
NCBI-ProteinID:
XP_017223442
UniProt:
A0A175YLG5
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Position
8:12232427..12238699
Genome browser
AA seq
1139 aa
AA seq
DB search
MALRSPRAPHDKGEGTSVVTYVRRTSSGRNVNYSRDDLDSEISGEFNNYTVHIPPTPDNQ
PMDPSITQRVEEQYVTSSIFTGGFNSVTRAHLMDKVIESETNHPQMAGTKGSMCAIPGCD
GKVMSDERGEDILPCECDFKICRDCYIDAVKSGGNVCPGCKELYKSTDLHEDVMENGRAM
LQLPFNVESKLERRLSSKMDRRLSLVRSTSNSALVRSQTGDFDHTKWLFETGGTYGYGNA
MWSKDGLNNEKHDDASEPKEFLSKPWRPLTRKLKIPAAVISPYRLLIFVRMVVLALFLQW
RITNPNEDARWLWLMSIICELWFAFSWLLDQLPKLSPVNRSTDLNVLKEKFESPSPGNPT
GRSDLPGVDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGSLLTFEAMA
EAASFADLWVPFCRKHDIEPRNPESYFSLKRDPLKNKVRQDFVRDRRRVKREYDEFKVRI
NGLPDVIRRRSDAYNAREEMKAVKLQKERVGEEMPETLKIPKATWMADATHWPGTWMASN
PDHSKGDHVGIIQVMLKPPSDESLHGTDDDANPINFTEVDIRLPLLVYVSREKRPGYDHN
KKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSQAIREGMCFMMDRGGDRICYVQFPQR
FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRSKEYNSGF
WSCFSGRKKRSASVSSAPEINGSLRMGDLDDEEEMALPLFPKKFGNSSFLLESIPVAEFQ
GRPLADHPSVKHGRPPGALTVPRELLDASAVAEAISVVSCWFEDKTEWGGRVGWIYGSVT
EDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFL
ASSKMKLLQRIAYLNVGIYPFTSFFLIVYCFLPALSLLSGEFIVQSLNITFLVYLLVITI
TLCMLAILEIKWSGIDLEEWWRNEQFWLIGGTSAHFAAVLQGLLKVIAGIEISFTLTSKS
SGDENDEDFADLYIIKWSSLMIPPITIIFINMIAIAVGVSRTIYSTIPQWSRLLGGVFFS
FWVLAHLYPFAKGLMGRRGRTPTIAFVWSGLIAITISLLWVAIDPPSGSTEIGGSFQFP
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcgatcgccgagagccccccatgacaagggggaaggtacttctgtggtgacc
tatgtgagaaggacttcatctggtagaaatgtcaattattcgagagatgatttagatagt
gaaattagtggtgaatttaataattacactgtgcatatacctcctacacctgacaatcaa
ccgatggatccttcgattacacagagagttgaggagcagtacgtgacgagttctattttc
acaggggggtttaacagtgttactcgcgcccatttgatggacaaagtgattgaatcagaa
acaaaccatccacagatggctggaacaaaagggtctatgtgtgctataccgggttgtgat
ggaaaagtgatgagtgatgagcggggcgaagatattcttccatgtgaatgtgattttaaa
atttgtagagattgttatattgatgctgtgaaatctggtggtaatgtttgtccaggatgt
aaagaactttacaagtcaacagacttgcatgaggatgtaatggagaatggacgggcaatg
ctacaacttccatttaatgttgaatcgaagttggagaggagattatcatccaagatggac
agaaggttgtcactggtgagatcaactagtaactctgcactagtaagaagtcaaacgggg
gattttgatcatacaaagtggttgttcgagacaggtggaacttatggatatgggaatgct
atgtggtcgaaagacggactaaataatgaaaaacatgacgacgctagtgagcccaaggag
tttcttagcaagccatggaggccccttactcgcaaattgaaaatacctgctgcagtgata
agtccatacaggctactaatttttgtgaggatggttgtcctggcattgtttctccagtgg
aggatcaccaacccaaatgaggatgcaagatggctctggcttatgtcgattatatgtgaa
ctttggtttgctttttcttggttacttgaccaacttccaaagctctcccctgttaatcgt
tctacggaccttaacgtattgaaagagaagtttgaatcaccaagtccaggcaatcccacc
ggaagatcggatcttcctggtgtagacatcttcgtctctactgctgatccagagaaagag
ccaccacttgttactgccaatacaattctttcgattcttgctgctgattatcctgttgaa
aagctttcatgttatgtgtctgatgatggaggttctctcctaacctttgaagccatggca
gaagccgcaagttttgctgatttatgggtcccattctgccggaaacatgacattgaacca
agaaatccagaatcttattttagtttaaagagagatcctcttaaaaataaggtgcgtcaa
gattttgtcagagatcgtaggcgagttaaacgtgagtatgatgagtttaaagttcggatc
aatggtcttcctgatgtgatacggaggcgttctgatgcttacaatgcacgggaggaaatg
aaagctgtaaaacttcagaaagaacgagtcggtgaagagatgcccgaaactttgaaaata
cctaaagctacttggatggcagatgccacacattggcctggtacttggatggcttcaaat
ccagatcattccaagggtgatcatgtaggaatcatacaggtgatgttaaaacctcctagt
gatgaatccctacatggcacagacgatgatgcaaatcctattaattttactgaggttgac
attcggcttccacttctggtttacgtttcacgtgaaaaacgccctggctatgaccacaat
aagaaggcaggggctatgaatgctttagttcgagcctcagctgttatgtcaaatggacct
ttcattcttaacctggactgtgatcactacatttacaactcccaagcaataagagaaggc
atgtgttttatgatggaccgaggtggtgatcgtatatgctatgtacagttccctcagagg
tttgaaggaattgacccatctgatcggtatgcgaatcacaacacagtgttctttgatgtt
aacatgcgtgccctagacggtctccagggtccagtttatgttggtactggatgcttattt
cgaagaattgcactgtatggttttgacccgccaagatcaaaagaatacaactctggtttc
tggagttgtttttctggccgcaagaaaaggagtgcatctgtttcttctgctcctgaaata
aacggatcacttagaatgggagacttggacgacgaagaagaaatggcccttcctcttttc
ccaaagaagttcggaaactcaagttttttacttgaatctatcccggtggcagaattccaa
ggtaggcctcttgctgatcacccttcagtaaagcatggacgccctcctggtgcacttacc
gtccctcgagaacttctggatgcctctgctgttgccgaggcaatcagtgttgtctcatgt
tggtttgaagataaaactgaatggggtggtcgagttgggtggatctacggctctgtaact
gaagatgtggtgacaggatacaggatgcataacaggggttggagatctatctattgtgtg
acaaagagggatgcatttcgaggaactgcacctatcaatctaactgatagactccaccag
gttctgcggtgggctacaggttcagttgaaattttcttttctcgtaataatgcttttctt
gccagctcaaagatgaaacttttgcaaagaatagcctacctcaatgtcggaatttacccc
ttcacctcattttttctcatcgtctattgtttcctcccagcactttccctcttatctgga
gaattcattgtccagagtcttaacatcaccttccttgtatatcttctggttattaccata
actctttgtatgctggccattcttgagatcaagtggtcagggattgatcttgaagaatgg
tggcgaaatgaacaattctggttaatcggaggcacaagtgcccattttgctgctgttctc
cagggcctacttaaagtcatagcaggaattgagatatcattcaccttaacctcaaaatca
tcaggtgacgagaatgatgaagattttgctgatctctacataatcaaatggtcatcgctc
atgattccaccaattacgataatcttcataaatatgatagctatagccgttggtgtcagc
agaacaatatacagcacgataccgcaatggagccgtttgttagggggagtgttcttcagt
ttctgggttttggctcatctctacccttttgccaaaggactcatgggaaggcgcggaagg
acgccaacaattgccttcgtttggtcagggcttatcgcaatcacaatctcgctcctttgg
gttgcaatcgatcccccatcagggagcactgaaattggaggctcctttcagtttccataa
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