Daucus carota (carrot): 108199940
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Entry
108199940 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108199940
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108199940
Spliceosome [BR:
dcr03041
]
Complex C
Other components
Complex C specific factors
108199940
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Gene cluster
GFIT
Motif
Pfam:
PSP
zf-CCHC
zf-CCHC_4
zf-CCHC_6
LprI
Motif
Other DBs
NCBI-GeneID:
108199940
NCBI-ProteinID:
XP_017223460
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All DBs
Position
8:complement(30919422..30923511)
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AA seq
503 aa
AA seq
DB search
MDTESLVESQLSKDVDVNSTCTESKDLRSDNLNQSNVGAQSDCVQAMSGGMSNNKLVETN
GQASSGSKRARVSDDLQAAVHVRFECLSRESKKKLEELLSEWSKWHAAHCVSSKDSYDAL
ESGGETYYPALQCGTENTSVSFLMETQAMKKQKIDCLSLKCDSVPLYDREYDFALKLTNG
SNEEDRVLSPLNASRCFNCGTYGHSLKECPKPRDSLAVSNARKEHQLKKNQNGGSGTHVL
TRYYQNTPRGKYDGLKPGALDAETRKLLCLAELDPPPWLNRMRELGYPPGYLDVEDSDQP
SGITIFDDDESCQQKEITEEVVVVEPGRTRSVSFPGINAPIPENADQSRWAASPLPQNIN
PSGYHSNQWSNISSELPYRGNSYFERQQSDNRNGFFSGYAQELDSLLSSYSGYSHYKEPD
CAASSGSTLRDGYSRLSGQHTPGLSPSYGNYVSSHSSGSNLTDEFLGAHRGHQFDVRPDH
LPSASNHSPFNISPNQFSYSRPF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggacactgaatctctagttgagtcccaattgtcaaaagatgtggatgttaatagcact
tgtactgaatcgaaagatttgcgtagtgataatttgaaccaaagtaatgtcggtgctcaa
tcggattgtgtgcaagcaatgagtggtggtatgagcaataataagttggttgagacaaat
gggcaagctagttcgggttctaaacgagctcgagttagtgatgatctgcaggcggcggtg
catgtaagatttgagtgtttgtcgagagagagcaagaaaaagcttgaggagcttttaagt
gaatggtcaaagtggcatgccgcgcattgcgtttcatctaaggattcatatgatgctctg
gaatctggtggggaaacatactatcctgctttacaatgcggaacagaaaatacatctgtg
tccttcttgatggaaacacaagcaatgaaaaagcagaagattgattgtctttcattgaaa
tgtgattctgttcctctttatgatcgagaatatgactttgctttgaagttgactaatgga
tctaatgaggaggatagggtcttaagtcctctaaatgcttctcgttgctttaattgtggc
acctacggccattcacttaaggagtgtcctaaacctagagatagccttgctgttagtaat
gcaaggaaagagcaccagttgaaaaagaaccagaatggtgggagtgggactcatgtatta
actcggtattatcaaaatacccctcgtggaaagtatgatggattgaagcctggtgctctt
gatgctgagacaagaaaactactttgtcttgcggaacttgatccacctccatggctcaat
agaatgcgtgaactgggatacccgcccggatatctagatgttgaagatagcgaccagccc
tctggaattacaatattcgatgatgatgaatcttgtcaacaaaaggagataactgaagaa
gtggttgttgtagaaccagggagaacaaggagtgtcagttttccgggaattaatgcacca
ataccagaaaatgcagaccagagccggtgggcagcttcaccgttgccccaaaacattaat
ccttcaggttaccattccaatcagtggtccaacatctcctctgagttaccgtatagaggg
aactcctattttgagagacagcagtcagacaatagaaatggcttcttctcaggctatgca
caagaacttgactctttattgtctagttattctggttactctcattacaaagaacctgat
tgtgctgctagcagtggttctactttaagggacggatattctagactaagcggccaacat
actcctggtttatcccctagctacggaaattatgtttccagtcacagtagtgggtcaaat
ttaacggatgagtttcttggagcccataggggtcatcaatttgatgttaggcctgatcat
ttgccaagtgccagtaatcacagtcctttcaatatttcccctaatcagttttcatattcg
cgcccattttag
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