Daucus carota (carrot): 108200007
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Entry
108200007 CDS
T05350
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108200007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108200007
04147 Exosome [BR:
dcr04147
]
108200007
04090 CD molecules [BR:
dcr04090
]
108200007
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108200007
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108200007
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108200007
CD molecules [BR:
dcr04090
]
Proteins
108200007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
ABC_ATPase
AAA_22
AAA_21
RsgA_GTPase
AAA_15
APS_kinase
AAA_30
AAA_16
DUF87
G-alpha
Motif
Other DBs
NCBI-GeneID:
108200007
NCBI-ProteinID:
XP_017223549
LinkDB
All DBs
Position
8:complement(31260800..31268090)
Genome browser
AA seq
1254 aa
AA seq
DB search
MGSKGGGGGGIFSYADGTDKVLMFFGTLGSIGDGLMSPLTMIALAGVIDQYSDKGPALPN
DVVDKYSLRLLYIAILVGASAFVEGLCWTRTAERQASRTRMEYLRSVLRQEVGFFDNKDA
SSTTFNVVSTMSTDAHLIQDVIAEKIPNFLAQITALISGILVAFLLSWRLALACLPFAIG
FVIPGVGFGKLMMNLAMKAREAYGVAGGIAEQAISSIRTVYSYVGEHQTLDRFSHELQKS
TDIGIKQGFAKGLLIGSMGMVFVAWAFIAWVGSVLVTKKGESGGHVFVSGISIILGGMSL
MGALPNLSFIAEAKAAATRMSGMITRKPEIDSENSRGKILEDVKGNIEFKEVSFSYPSRP
DTIILDGFNLKIKSGKTVGLVGGSGSGKSTIIALLERFYDPSKGDIFLDGHKIRKLQLKW
LRSQMGFVNQEPVLFATSIKENILFGNEEASMELVVSAAEAANAHEFIEQLPHGYETQVG
QYGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAESEKVVQEALDQASVGRTTIII
AHRLTTIRKADVIVVLQSGKVIESGSHDKLMQSNGGEGGAYFNMVQMQQSATQNMTSTSS
NHGIYGRTSNTPSPRTPISVRSSWHNSPVSPFSQEISMSMAHSVQAYTYHDSDSEDETLE
FSSEPNPSLWHLLQMNAPEWKKALLGCLGSVGFGVIQPVHAYCLGSVVSVFFITDNDSKV
QSETRFYAIVFTSLGVLSFFANLLQHYNFAIMGERLTKRVREKMLKNVLTFEIGWFDHDE
NTSAAVCARLATEANMVRALVGDRISLLLQVITSAFLAFLFALILAWRIAIVMIAVQPLV
IACFYSKSVLMKSLSGKAQKAQNEGNQLASEAVVNHRTITAFSSQERILGLFETTLKGPQ
KESIRQSWLSGLGLCTSQFITTASMALTFWYGGRLINQKLINSDHLFQVFFILMSTGKNI
ADAGSMSSDLARGKNAIRTVFAILERKSEIEPQDSEGIKVTNTLNGCIELKNVFFAYPSR
PEQLIFQGLSLTIEAGKTLALVGQSGSGKSTVISLVERFYDPLKGSVLIDDQDIKSYNLQ
SLRSHIALVSQEPTLFAGTIRENIVYGKEMTTESEITKAAKLANAHEFISSMKDGYETYC
GQRGVQLSGGQKQRIALARAILKNPAILLLDEATSALDSLSENLVQEALEKMMVGRTCVV
VAHRLSTIQKSDTIAVVKDGKVVEQGSHTQLLAEGEQGSYFSLIKLQRGQSPIR
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggggagtaaaggtggcggtggaggtggcatttttagttatgcagatggtacagacaaa
gtgcttatgttttttggtactttaggtagcattggagatggcttgatgtctcctcttact
atgattgctctagccggtgtgatagaccagtattcggataaaggccctgctctgcctaat
gatgttgtcgacaagtactcgctacgactgctctacattgctatcttggttggagcctct
gcgtttgttgaaggactttgttggacgagaactgcagagaggcaagcgtctagaactcgg
atggaatatttgagatcagtcctcaggcaggaagttggattctttgataacaaagatgct
tcctcgacaactttcaatgttgtgtctactatgtccacagatgctcacttaatccaagat
gtcatagcagagaagataccaaactttctggctcaaatcacagcacttatatcaggcata
ctagtggccttcctattatcatggcgactagcgttggcttgtttgccctttgcaatcgga
tttgttattccaggtgtaggattcgggaaattaatgatgaatttggctatgaaggcgcgg
gaggcttatggagtagcaggaggtattgcagaacaggcaatctcatctatccgaactgtt
tattcctacgtgggggaacaccaaacattagatagatttagccatgaacttcagaaaagc
acagacattggtataaagcaagggtttgctaaaggattactgataggaagcatgggaatg
gtatttgttgcttgggcatttatagcgtgggtcggaagcgttttagttactaagaaagga
gaatctggtggccatgttttcgtgtctggcatctccattattctgggaggaatgtccttg
atgggggctcttccaaatctctcattcattgcagaggcaaaagcagcagctaccaggatg
tccgggatgataacaagaaagcctgaaatagactctgagaatagccgtggaaaaattcta
gaagatgtgaaaggaaatattgagtttaaggaggtttctttctcatatccatctagaccg
gatactataattcttgatggatttaacctcaaaattaaatctgggaagactgttggtctt
gttggaggtagtggctctggaaagtctacgatcattgctctgcttgaaagattctatgat
ccgtccaaaggcgacatctttcttgatggacataaaataaggaaacttcagctcaaatgg
ttaagatcccagatgggcttcgttaatcaggagccagtgttgtttgcaacatcgattaag
gagaatatactctttgggaatgaagaagcttcgatggaacttgttgtttctgcagcagag
gctgccaatgcgcatgaattcattgaacaattaccccatggttatgaaactcaggtagga
caatatggggttcaattatccgggggacaaaagcagagaattgcgatagcaagagcaatg
cttaaagaccctaagattcttctacttgacgaagctacaagtgctcttgatgcagaatct
gagaaagttgtgcaagaagccctcgatcaggcttcagttgggaggacaactataatcatt
gctcatcgtctcactacaatccgaaaggctgatgtgattgtagttctccaatcagggaaa
gtgattgaatcaggctctcatgacaaattgatgcaatcaaatggcggtgaaggtggcgcc
tactttaatatggtgcagatgcagcaatcagcaacacaaaatatgacctctactagttcg
aaccatggaatatacggacgaacatccaacactccatctccaaggacgcctattagtgtg
agatcaagctggcataatagccctgtttcccctttcagccaagaaataagcatgagtatg
gctcattctgtccaagcatatacttaccatgatagtgatagtgaggatgagacactcgag
ttttcttcagagcctaatccatcactatggcatttactgcaaatgaatgcccctgagtgg
aagaaagccttgcttggatgtctagggtctgttggttttggggtgattcagccagtccat
gcttattgtttgggatcagtagtgtctgtattcttcatcaccgataacgattctaaggta
caatcagagaccagattctatgctattgttttcacaagtttgggagttcttagcttcttc
gccaatctactccaacactacaatttcgccatcatgggagaacgcttaaccaagagggtg
cgagagaaaatgcttaaaaacgtgctaacctttgagattggatggtttgatcacgacgag
aacacaagtgcagctgtatgtgctaggcttgccactgaagcaaacatggttagagcccta
gttggagatcgcatttcattgctgcttcaggtcattacaagcgcttttctggccttttta
tttgccttgatacttgcgtggagaatagctattgtgatgatagctgttcagcctctggtc
attgcatgcttttactcaaagagtgttttaatgaagagtttgtctggaaaggcacaaaaa
gcacaaaatgaaggaaaccaacttgcaagtgaagcagttgtgaatcatagaaccatcact
gcattttcttctcaagaaagaattttaggacttttcgaaactacactgaaaggcccccaa
aaggagagcattagacagtcatggctttcgggtttaggcctatgtacctcacagtttata
acaactgctagcatggctttgacattttggtacggaggaaggcttataaatcaaaaacta
ataaactcagaccatctgtttcaagttttcttcatcttaatgagcaccggtaagaacata
gcagatgcaggaagcatgagttcagatctggcacgaggtaagaatgccattagaacagtt
tttgcaatcctagaaaggaaaagtgagatcgaacctcaagactctgaagggatcaaagtt
acaaacacacttaatggctgcatagaattaaagaatgtgttctttgcatatccatcaagg
cctgaacaactaatttttcaaggcttaagtctcacaatagaagctggtaaaacactggca
ctcgtcggacaaagtggttcaggcaaatcgactgtcatcagcttggttgaaagattctat
gaccctttgaagggatcagtactaattgacgaccaagacatcaagagctacaacctgcaa
agtttaaggtcacatattgcattggtgagccaagaacctactctctttgcaggaacaatt
cgtgaaaacattgtctatggaaaagaaatgactacagaatcagagatcaccaaggctgct
aagcttgccaatgctcatgaatttataagttcaatgaaagacggatatgagacgtactgt
ggacaaagaggagttcagctctctggagggcagaaacaaagaatagcacttgcgcgagca
atactaaaaaaccctgccatccttctcttagacgaagcaactagtgcccttgacagttta
tccgaaaatctagtacaagaagccctggaaaaaatgatggttggccgcacttgtgtagta
gttgcacatcgactgtcaacaatacagaagtcagacaccatagctgttgtgaaagatggg
aaagtagttgagcaaggatcacatactcaactactagctgagggagaacagggctcctat
ttttcgttaataaagctccagagaggccaatctcctattcgatga
DBGET
integrated database retrieval system
