Daucus carota (carrot): 108200060
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Entry
108200060 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108200060
KO
K13130
gem associated protein 2
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108200060
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108200060
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GFIT
Motif
Pfam:
SIP1
bHLH_IRO3
KIAA1549
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
108200060
NCBI-ProteinID:
XP_017223609
UniProt:
A0AAF0XP35
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Position
8:13032542..13037861
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AA seq
547 aa
AA seq
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MATDRNLNDGLISPVPEKRLKIDTSLCECTSLKKIQENSKNNQTMENPTQETGFDHNNMG
LAQIVEDLDNKQEDTVMTEAAQNQGKEIEKRRNKARRRSKRKGKGRDWNGTSAEDEKRGD
CKQLDFGMVFKGGIGCEMKREGAAFFYSRDEMEGLRFIDKDRQLNKWVEVYCGLGPVVSK
EYDALVAHQNEQDGVDFDPRKNLVEKVLLGGRHSHAVDPPDTASDLIGYDLDSCTGNEDD
CSEDDDSDAEYNSIQRPAFVVTGEPNFDAGPAMDGFEYLRRVRWETERVQKVTFAKIEES
KLCEQTVYIPKIPEIVQCPQHLLPLKEWEASLLNDFSELRLAISRYESSATNEVTGKMQL
LPNILEEDCSTQILESANSYNPTDGTVSMHSSARDEKDASTIASPKISNSEDTANTPNLS
TISCLIQSSAGGEDDASPKILSTDDIVNSPTLSTVLGIEPVARVSMLKKRIKLAEDMTSL
SKNDCLWLFALCAAVDTPLNADTSAALRDLLRKCSSLRAEKSELNDEVVMLNILATIAGK
YFGQSDD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagatcgcaatttaaacgatggcctcattagccccgttccagaaaaaaggctg
aagattgatacatcactgtgtgagtgtacttcactaaaaaaaattcaagaaaacagtaaa
aataatcaaaccatggaaaatccaacacaagagacggggtttgatcataacaatatgggt
cttgctcaaattgtggaggaccttgataacaagcaagaagatactgtaatgactgaagct
gcgcaaaatcaaggtaaagaaattgagaaaaggcgaaacaaggcgaggaggcgttcgaaa
agaaaggggaaagggagggattggaatggaacaagtgctgaggatgaaaagaggggagat
tgtaagcagctagattttgggatggtttttaaaggtgggattgggtgcgagatgaaaagg
gagggggctgcttttttctattcgagagatgagatggagggtttgaggtttatcgataag
gatcgtcagttgaacaagtgggttgaggtatattgtggtcttggacctgttgtgtcaaag
gagtatgatgctttggttgctcatcagaatgagcaagacggggtcgattttgatccgcgc
aagaatttggtggaaaaagttcttttgggtggaaggcattctcatgctgtggatcccccg
gatacagcttcagatcttattggttatgatttagatagctgcacaggcaatgaagatgac
tgctctgaggatgatgacagtgatgcagagtacaatagcattcaaaggcctgcatttgta
gttactggagaacctaattttgatgctggacctgcaatggatggcttcgaatatctcagg
cgtgtaaggtgggagactgaacgggtccagaaagttacattcgccaagattgaagaaagt
aaattgtgtgaacagactgtttatattcctaagattccagaaattgtgcaatgtccacag
cacttactgccactgaaagagtgggaagcttcgctcctcaatgatttttctgagctgagg
ctggctatatcacggtatgagagttctgctactaatgaagttactggtaaaatgcaactt
ttaccaaatattcttgaagaagattgctccactcaaattcttgaaagtgcaaattcttac
aatccaactgatggaactgtttccatgcactcgtcagctagggatgaaaaggatgcttcc
accattgccagtccaaaaatttcaaactcagaggatacggctaataccccaaacttatct
actattagttgtttaatccaatcttctgctggtggcgaagatgatgcttctccaaaaata
ttaagcacagatgatattgtaaactccccaaccttgtctactgttctaggaatcgagcct
gttgcacgagtttcgatgctgaaaaagcgcataaaattggcagaagacatgacctcactt
tccaaaaatgattgtttgtggctttttgctctttgtgctgctgttgatactccactaaat
gctgacacatctgcagctcttcgggatctgctacgtaaatgttcaagtttgcgggctgaa
aaatcagaattgaatgatgaagttgtgatgcttaatatcctagcaacaatagcaggcaag
tacttcgggcaatcagatgactga
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