Daucus carota (carrot): 108200186
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Entry
108200186 CDS
T05350
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108200186
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108200186
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108200186
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108200186
03041 Spliceosome [BR:
dcr03041
]
108200186
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108200186
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
108200186
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108200186
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108200186
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108200186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
108200186
NCBI-ProteinID:
XP_017223730
UniProt:
A0AAF0XU15
LinkDB
All DBs
Position
9:6206606..6209333
Genome browser
AA seq
321 aa
AA seq
DB search
MMTMEGMMDGGVLDDIIRRLLEGKGGSKQVQLSEGEIRQLCVNARQIFLSQPSLLQLSAP
IRICGDVHGQYQDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKV
FLLRGNHEDAKINRIYGFYDECKRRFNIRLWKIFTDCFNCLPIAAIIDHKIMCMHGGLSP
ELETLDQIKNIQRPTEIPDNGLLCDLLWSDPDPNVEGWGDSDRGVSCTFGADIVAEFLER
NDLDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYGGEFDNAGALLSVDESLMCSFEILKP
VEKPGTSKMPLRKPPKIGTSA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggaagggatgatggatggaggggtgttggatgatataataaggagattg
ttggaagggaaaggtgggagcaaacaagttcagctgtcagagggagaaatcagacagctt
tgtgtcaacgctagacaaatctttctttctcagccttctcttcttcaactcagcgctccc
atcaggatctgtggtgatgtacatggtcaatatcaagacctattgagacttttcgagtat
ggaggattccctcctgctgccaactacctttttcttggagattacgtagatcgtggcaag
caaagcttggaaaccatatgtttgcttttggcatataagataagatatcctgataaagtg
ttcctgttgaggggaaaccatgaggatgcaaaaatcaatcggatatatggcttttatgat
gaatgtaaaaggagatttaatatccggctttggaaaatattcaccgactgctttaattgt
ttgcctattgctgcaattattgatcataagataatgtgcatgcatggaggactttcgccg
gaattggagaccttggatcaaattaaaaatattcagaggcccactgaaattccagataat
ggacttttatgtgatttgctctggtcagaccctgatcctaatgttgagggttggggagat
agcgatcgaggtgtctcatgtacatttggagctgacatagttgctgaatttttggaaagg
aatgacttggatctaatatgtcgtgctcatcaggttgtggaagatggctatgagttcttt
gctaaacgtaaacttgtcacaatattttctgctccaaactatgggggcgagtttgacaat
gcaggtgcactgttgagtgtagatgaatccctaatgtgttcttttgagattttgaaaccg
gttgagaagccaggcacgtcaaagatgcctcttagaaagccccccaaaattggaacgtcc
gcataa
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