Daucus carota (carrot): 108200210
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Entry
108200210 CDS
T05350
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108200210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108200210
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108200210
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108200210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108200210
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108200210
Messenger RNA biogenesis [BR:
dcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108200210
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP60 / Chaperonin
108200210
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108200210
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108200210
Exosomal proteins of other body fluids (saliva and urine)
108200210
Exosomal proteins of breast cancer cells
108200210
Exosomal proteins of colorectal cancer cells
108200210
Exosomal proteins of bladder cancer cells
108200210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
108200210
NCBI-ProteinID:
XP_017223765
UniProt:
A0AAF1BE91
LinkDB
All DBs
Position
9:41924999..41930787
Genome browser
AA seq
577 aa
AA seq
DB search
MYRFAANLASKARIASNSSKQIGSRLSLSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRTVVIEQPYGAPKVTKDGVTVAKSIEFKDRVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGSKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMERVGKEGVITIQDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELDDPLILIYEKKISSINSVVKILELALKRQRPLLIVAEDVDSEALATLILNKLRA
GIKVCAIKAPGFGENRKSNLQDLAVLTGGQVITEELGMNLDNVELDMFGSCKKITISKDD
TVVLDGAGEKKAIEERCEQIRSSIELSTSDYDKEKYQERLAKLSGGVAVLKIGGASETEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYATKELEKLQTANFDQKIGVQIIQDALKT
PVHTIASNAGVEGSVVVGKLLEQDDPDLGYDAAKGAYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVELPKDDKEVPMGGGMGGMGGMDY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtatagatttgcagcaaatcttgcctccaaagcacggattgcttcaaacagtagcaaa
cagattgggagtagattaagtttgagcagaaactatgccgccaaggatattagatttggg
gttgaagcccgggccttaatgttaaaaggtgttgaagagctcgcagatgcagttaaagta
actatggggcctaaggggcgtactgtggtcattgagcaaccttatggggcaccaaaagtt
actaaagatggggtaacggttgctaagagcatcgagttcaaggacagagtgaagaacata
ggagcaagcctcgtcaaacaggttgcaaatgccaccaatgatgttgcaggggacggtacc
acatgtgccacagtcctcacccgtgcaatatttactgagggttccaaatctgttgcagcc
ggtatgaatgcaatggaccttagacgtggcattaccatggcagtagatgctgtggtgaca
aatttgaaaagtagagcacggatgataagcacatctgaagaaatagcacaggttggaaca
atatctgccaatggagagagggaaattggtgagttaattgcgaaggcaatggaaagggtt
ggcaaggagggagtaataacaattcaagacggaaagacactgtacaatgagttggaagtt
gttgaaggaatgaagctcgataggggttacatatccccatattttatcacaaatcagaag
aaccagaaatgtgagttagatgatcctctcattctaatttatgagaagaaaatctctagc
ataaattcagtggtgaaaatattagaattggcgttaaagagacaaaggcctctgttaata
gttgctgaagatgttgatagtgaagcattagcaacattaattctgaataagctgcgtgct
ggaataaaggtttgtgcaatcaaggctccagggtttggagaaaatagaaagtctaatctc
caggatcttgctgtacttactggaggacaggttattactgaagagcttggtatgaacctc
gacaatgtggagttggatatgtttgggtcatgcaaaaagatcacaatatccaaggatgac
acagttgttcttgatggtgctggtgagaaaaaggctatagaagagaggtgtgaacagata
aggtcatcaattgaattgagtacttctgattatgacaaagagaagtatcaagaaagacta
gcaaagctttctggtggtgttgctgtattgaagattgggggagctagtgaaactgaagta
ggtgagaagaaggatagagttacagatgcactgaatgccacaaaagctgctgtagaggaa
ggaattgtgccggggggtggagttgctcttttgtatgcgactaaagagttagaaaagctt
caaacagccaactttgaccagaagattggggtacaaattattcaggatgcccttaagaca
ccagtacacactattgcatctaatgctggtgtggaagggtctgttgttgttggcaagctc
ttggagcaagacgaccctgatcttggttatgatgcggccaaaggtgcttatgttgacatg
gtcaaagcgggaattattgacccactgaaagtgattaggacggcactggttgatgcagca
agtgtatcttccttgatgacgactacagaagctattgtggtcgaacttcccaaggacgat
aaagaagtaccaatgggaggtggcatgggtggtatgggcggcatggattattga
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