KEGG   Daucus carota (carrot): 108200418
Entry
108200418         CDS       T05350                                 
Name
(RefSeq) lysine-specific demethylase JMJ29 isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dcr03036]
    108200418
Enzymes [BR:dcr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     108200418
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108200418
SSDB
Motif
Pfam: JmjC DUF2533 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 108200418
NCBI-ProteinID: XP_017224045
LinkDB
Position
9:complement(6192355..6201038)
AA seq 1120 aa
MESSSARKRKYGDGVDGSDSSSGASIKRQYSRTTGRSGSESRCHQCQRISSGRVLCCSKC
ENRVYCLRCVTQWYPQMNDEAFIMACPVCRDNCNCTSCLSLEMPLQDTTRVELRFTKDDK
LHHSKYLLKLLLPSVVRFNEEQITEREMEAKIQGLSLPEVKVQVANCDVDDRLYCNNCKT
SIVDFHRSCTHCSYDLCLICCRELRTCSLQGGQEEAIVQYLDPGMAYMHGQQPIYPLVTS
TGTSCLAAKTKSNYHAKSISEWKIDEHGMIFCPPESMGGCGQGVLVLKQVLPDNWVSNML
AKAEELYELYGLKDMPNTEQRCSCSHSSCDNIARENFLKAASRDNSDDNYLYCPSAVDIK
AGDLNHFQAHWSKGEPVIVSDVLNTAYGLSWEPAVMSRAIQEMKSQPVNMIALNCLDWCE
LKLNIKKLFKGYMDGLVDKFDWPQMLKLDDWPPSGLFEEHLPRHYVEYISTLPFKEYTHP
CSGYLNLSVKLPNDHLVPDMGPKMYLAYGFPQELGRGDSVTKIHCCESDAVYVLAHANEV
TVTPLQLAKIKNLKERHNLQDQREIYINGQISNGFEAHTECNNVEELEKREGCALWDIFR
REDAPKLKEYLIKHFKEFRHIYCVPVQQVFDPIHDRTFYLSTEHKERLKKEYGIEPWAVV
QNLGDAVFVPAGCPCQVRYIKSCITVSTGFVSPENVNECIRLAGELRLLPQNHRAKEDKL
EVKKLILYAMRNVLDDLEEFTNIESKYSSCHSLSQPIKTECVNISSDTNYLGSSKKMFER
SIQKLSVEISRYFNLSNNSPSMDLKLPVHDAPSSKRDFLKEPKISEDVSYAISNRQQTPC
SDHSPEFYSQTSVSLAPDTVRFFKHLADLIQGNKFDELKTLPPHSQLDDQIIQDYEKVLK
KYLSGRLTALAEESNYQEFHKVLYGLLACRRIPSRLHQKFLALRWELPNLTSRAYELNRE
VSRGMLLPIAKAKEKEELASMLRKYWQIVDNLVKLEKEREFILYEIVELQAKEEPIGAEV
TNSEASGMMNKNDAGKLEQEKKYKSDEIVRLQTVNKAIDTKIIKFVDEAKMLQKDAAAQH
YKVTSLEALEAVYKVNVLNSMDKLAIMELKWKDRVASLDY
NT seq 3363 nt   +upstreamnt  +downstreamnt
atggaaagttctagtgcgagaaaacgaaagtatggtgatggagttgatggatcagatagc
tcatcaggagcttcaattaagcgccagtatagtagaactactgggagatcaggtagtgaa
tcgagatgtcatcagtgtcagcggattagttccggccgtgttttgtgttgtagtaagtgt
gagaacagagtctactgtctccgatgtgtgactcaatggtatcctcagatgaacgatgaa
gcttttattatggcgtgtcctgtttgtcgagacaactgtaattgcacaagctgtctaagc
ttagaaatgccgttacaggacactacaagagttgaattacgtttcactaaagatgataaa
ctccaccactcgaaatatctcctgaaactactactcccttctgtggtacggtttaatgag
gagcaaattacagaaagggagatggaggcgaagattcaagggttatcacttccagaggtt
aaagtgcaagtagcaaactgtgatgttgatgatcgattgtattgcaacaactgcaaaact
tctattgttgacttccataggagctgtacacattgctcatatgatctttgccttatttgt
tgccgggaattgcgcacttgctctctgcagggaggtcaggaggaagctattgtgcaatac
ttggaccctggaatggcttatatgcatggtcaacaaccaatatatccgctggtcactagt
actgggacttcatgtctggctgctaaaacaaaaagtaattatcacgcgaagtcgatatct
gaatggaaaatcgacgagcatggcatgattttttgtcccccagagagtatgggtggctgt
ggtcaaggagtattagtattaaagcaagtcttaccagacaattgggtctcaaacatgtta
gcaaaagctgaagagttatatgaactttatgggctgaaggacatgccaaacactgagcaa
cggtgctcctgctcccattcatcttgtgataacattgccagagagaattttttaaaagcc
gcttctcgagataactcagatgacaattacctgtactgtccaagtgctgtcgacattaaa
gccggagacttgaatcattttcaggctcactggtcaaaaggtgaacccgtgattgtgagt
gatgtgcttaacactgcatatgggctaagctgggaaccagcggttatgtcacgggcaatc
caagagatgaagtcccagcctgttaatatgattgcccttaattgtctagattggtgcgag
ttgaagctaaatataaaaaagctctttaaaggctatatggatggtctagttgacaagttt
gactggccacaaatgctgaagcttgatgattggcccccgtctggtttgttcgaggagcat
ctaccacgtcattatgtagagtacattagtactttgcccttcaaagaatacacacatcca
tgcagcggctacttgaatctttctgtcaagttacctaatgaccatttggtgccagatatg
gggcccaagatgtatcttgcttatggctttccccaggaactaggacgtggagactctgta
acaaagatccattgttgcgagtcagatgcggtgtatgtgttggcacatgctaacgaagta
acagttactcctttacaacttgccaagattaaaaatttgaaagaaagacacaatttacag
gatcaaagagaaatatatattaatggccagatctcgaacggattcgaagcgcacacggaa
tgtaacaatgttgaagaattagagaagagagagggatgtgctctttgggacatctttcgc
agagaggatgctcctaagttaaaggagtatctcataaaacatttcaaagagtttaggcat
atatattgtgtgccagtgcagcaggtttttgaccccattcatgatagaacattctactta
agcacggagcataaagaaaggcttaagaaggaatatggaattgaaccatgggctgtggtg
caaaacttaggagatgcagtatttgttcctgcgggctgtccttgtcaagttagatatata
aaatcatgtataacagtttcgacgggattcgtgtcacctgaaaatgttaatgagtgcatc
cgtttagcaggggaacttcgtcttctcccccagaaccacagggccaaggaagacaagtta
gaggtgaagaaattaatcctttacgcaatgagaaatgtgttagatgatttggaggagttt
accaacattgagagtaagtactcctcctgtcattcactcagtcagcctatcaagactgag
tgtgtaaatatcagctcagatacaaattacctgggaagcagcaaaaagatgtttgagagg
tctatacagaagctctcagttgaaatatctagatattttaatctatctaacaatagcccg
agcatggatcttaagcttcctgtacatgatgctccctccagtaaaagagacttcctaaag
gaacctaagatttctgaggatgtttcttatgctataagcaacagacaacaaactccttgt
tcagaccattctccagaattctacagtcaaacatccgtgtccctcgcacccgacacagtt
aggttctttaaacatttggcagacctaatacaaggaaacaagttcgatgaattgaagacc
cttcctcctcactctcagctggatgatcaaataattcaggattatgagaaggtactcaaa
aagtatttgtctggacgacttacagcccttgctgaggaatcaaattaccaggagttccat
aaagtcttatatggtttgcttgcttgtcggaggatcccttcaagattacatcagaaattc
ttagccctccgttgggagttgccaaatttaaccagtagagcttacgagcttaatagggaa
gtatcccgaggcatgctcttgcctattgccaaggccaaggagaaagaagagttggcgagt
atgttgcgcaaatattggcagattgtagataatctggtgaagttggaaaaagagagagaa
ttcatcttgtatgagatagttgagcttcaagcaaaggaagaaccaataggtgctgaggtc
acaaattctgaagcttctggaatgatgaataagaatgatgcaggaaaactggagcaagag
aagaaatataagtcagatgagatagtcaggcttcagactgttaacaaagctatagacacg
aagatcatcaagtttgtcgatgaagctaaaatgttgcagaaagatgctgctgctcagcat
tataaagtaacaagccttgaggctttggaagcagtatataaggttaatgttctcaactcc
atggataagttggctatcatggagctcaagtggaaggatagagtagcatctctggactac
tga

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