KEGG   Daucus carota (carrot): 108200449
Entry
108200449         CDS       T05350                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03082  ATP-dependent chromatin remodeling
dcr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108200449
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108200449
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dcr01009]
    108200449
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108200449
   03036 Chromosome and associated proteins [BR:dcr03036]
    108200449
Protein phosphatases and associated proteins [BR:dcr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108200449
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     108200449
    SWI/SNF complex
     108200449
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    108200449
   PBAF complex
    108200449
   SWI/SNF complex
    108200449
SSDB
Motif
Pfam: SNF5 GP70
Other DBs
NCBI-GeneID: 108200449
NCBI-ProteinID: XP_017224130
UniProt: A0A169WUY0
LinkDB
Position
1:complement(36274993..36280399)
AA seq 240 aa
MKSHSTWGVSKNPVKFRMPTAENLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRT
VRDLKLPPAFVTQIAQSIQSQLGDFRSYEGQDMYTGEKIIPIKVDLRVNHTLIKDQFLWD
LNNFESDPEEFARTFCKDLGIDDPEVGPAIAFAIREQLYEIAIQNVSSARESRISKKGRR
GFEHSLPSKAGGTGLDLMKLYGFRSSVIRKRKEWDVYEPIVDKLSKEEVGILEAKEERNA
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaaatcgcactcaacatggggtgtttcaaagaacccagttaagttcagaatgccaact
gctgaaaatttggttccgattcgtctcgacattgaaattgatggccagagattcagagac
gcttttacttggaacccttctgatcctgattcagaagtagtggtgttcgcaaaaagaact
gtaagagacttgaagcttccacccgcatttgtaactcagattgctcaatctatacaatcg
cagctgggtgattttagatcatatgaagggcaagatatgtacactggtgaaaaaattatt
ccgattaaggttgatcttcgagtgaatcataccctaattaaggaccagttcctgtgggat
ttgaacaactttgagagtgatcctgaagaatttgcaagaaccttttgcaaagatttgggt
attgatgacccggaagtcggacctgcaatagcctttgcaatcagggaacagctctatgag
attgcaattcagaatgtatcgtctgcaagggaaagtagaataagcaaaaagggtcgtaga
gggtttgagcattctctacccagcaaagctggtggcactggattggatttgatgaagttg
tatggttttagatcgagtgttattcggaagagaaaggagtgggatgtgtatgagcccatt
gttgacaagctatcgaaggaggaagtgggtatcctggaagcaaaagaagagaggaatgct
taa

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