Daucus carota (carrot): 108200551
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Entry
108200551 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108200551
04121 Ubiquitin system [BR:
dcr04121
]
108200551
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108200551
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108200551
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108200551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-ANAPC11
Prok-RING_1
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_10
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108200551
NCBI-ProteinID:
XP_017224236
UniProt:
A0A175YGJ2
LinkDB
All DBs
Position
9:complement(36786780..36791402)
Genome browser
AA seq
328 aa
AA seq
DB search
MASAEATQQFYFCHQCDLNVAIYLRPNTDPLCPNCRDGFLEEIDDPMRNPNPDPVDPLAH
FLSTFPIFFGDSRHPFGNRETPSNARRVTGVRYGPRGPSRVNMEGPEFDPFAFFQDYVGN
LRAGGANIQFVFENNPSGGEGLPANLGDYFLGQGLEQLIQQLAENDPNRYGTPPASRTAV
EGLPDVVVDDKLLGSDLAQCAVCQDDFEKDMVVKQMPCKHVYHSECLLPWLELHNSCPVC
RYELPTDDPDYENRVRGTAASGGENDSSGNVRVGSSGSGTDTGDDEEGGNLRSFVERTFS
IMFRPRSSRTDNSGGDSGSGGPRNNDTN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgaagcaactcagcaattttatttctgccaccagtgcgacctcaacgtg
gccatctatctcaggcccaacactgatcctctctgccccaattgtcgtgatgggtttctt
gaggaaatcgatgacccgatgcggaaccctaatcctgacccggttgacccgttggcccat
tttctctcaacttttcccatcttttttggtgattctcgacacccttttggaaatcgtgag
accccatcgaatgctaggagggttaccggggttcgttatgggccgagggggccgagccgg
gtcaacatggagggacccgagtttgacccgtttgcgttttttcaggactatgtggggaat
ttgagggctggtggggcaaacattcagtttgtgtttgagaataatccttctggtggtgag
ggtttgcctgcaaatttgggcgattattttctgggacaagggctggagcagttaattcag
cagctggctgagaatgacccgaatcgatacgggaccccgcctgcttccagaactgctgtg
gaggggcttcctgatgttgtggttgatgacaagttgttgggctctgatttggcacagtgt
gctgtgtgtcaagatgatttcgagaaggatatggttgttaagcagatgccgtgtaagcac
gtgtatcattctgagtgtttgttgccctggttggaattgcataattcttgccctgtttgt
aggtatgagttgcctactgatgatcctgattacgagaatcgtgttagaggtaccgctgct
tccggaggtgagaatgattcaagcggtaatgtgagggttgggtcttccgggtcggggact
gacaccggggatgatgaggaaggtggaaaccttaggagtttcgtggagaggactttcagt
atcatgttcaggcctcgcagttccaggactgataacagtggtggggattcaggttctgga
ggtcctcggaacaatgacacaaattag
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