Daucus carota (carrot): 108200629
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Entry
108200629 CDS
T05350
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g21065-like
KO
K23541
Ca2+/H+ antiporter, TMEM165/GDT1 family
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108200629
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108200629
Membrane trafficking [BR:
dcr04131
]
Endosome - Golgi transport
Others
Others
108200629
Transporters [BR:
dcr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
108200629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
DYW_deaminase
PPR_1
PPR_3
E_motif
PPR_long
Eplus_motif
TPR_30
AEP1
Glyco_hydro_15
Motif
Other DBs
NCBI-GeneID:
108200629
NCBI-ProteinID:
XP_063940017
LinkDB
All DBs
Position
9:complement(29187739..29192078)
Genome browser
AA seq
787 aa
AA seq
DB search
MNKNSSICKMQFSPKNTNTISKIMWGIALGSRVKRIIPFHSNHLRHYSSSHSQLPNYVHA
NLLKNGTFGELSVTNYVLSLYIKSKDLVCAVQMFDEMLDRDVRSWTMIISGLVQVGSCRM
ALDMFADMHKEGIVPNQFTFSSVLKCCSRLNEVRMGKSVHGWIVCNGVFVDTALENSVLD
FYVKCGSFDSAKLYIESMTNKDIVSWNIMINAYIQIGDMETALGLFRRLPVKDASSWNTI
IRGHLQNDNYGIAMELLYEMVKSGTALSKETFSIAFGLVASLTALDLGMQIHGRLLRSGI
HHDGFLRNSLVDFYSKCGEMEKASFVYQGFPKCNASDRCSKNNNKSLPHSFSQSSMVTGY
VQNGKLQEALKMFTTMVTDRFEVDKFTLTSIVTGCANAGLLELGQLIHAQIVKAGQPFDI
FLSSSMIDMYAKCGELDDAWSIFRETKVRNTVLWTSVISGYGLHGRGRDAIQMFNWMLAE
GIKPNEISFVGLLTACSHAGLLNEGIHYFMVMKEEFGIKPQVEHFTCMVDLFGRSGRLDD
IKDFISKNKISNVASVWRSFLSSCRIHRNIEMAKWVSDKLFELEPPTAGSYILLSNTCAS
GDKWDDVAQVRGLMKDMGLMKHPGQSWIQLKNQVHSFVMGDRSHPEEAAIYSYLNELIQR
LKEIGYLTEANIVMQDVEEEQKELLLAFHSEKIAIAYALMKTSTGSPIRIMKNLRVCTDC
HSFMKCTSLLLEREIVVRDLRRFHHFISSTVTVLVEIIGKVRMIYNACELFHKVSQYLET
CGFYCHQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaattcttcgatatgcaaaatgcaatttagtccaaaaaatactaatacgatt
tcaaaaataatgtggggcattgccttgggctctcgtgtcaaaagaataataccatttcat
tcaaaccatttgcgtcactactcgtcatcacattctcaactcccaaactatgttcatgcc
aatttactcaagaacgggacttttggggagttaagtgtcactaattatgtgctcagtctt
tatataaagtctaaagatttggtctgtgcagttcaaatgtttgatgaaatgcttgacaga
gatgttcggtcatggacaatgatcatttcaggtttggtgcaagttggttcgtgtcgaatg
gcattggatatgtttgctgacatgcacaaggaaggcattgtgcccaatcagtttacgttt
tccagtgttctcaagtgttgttcgaggttgaatgaggttcgaatggggaagtcggttcat
gggtggatagtgtgtaatggggttttcgtagatactgcattggagaattctgttttagat
ttttatgtgaaatgtgggtcttttgattctgccaagttatatattgagtcgatgactaat
aaagacattgtatcatggaacattatgattaatgcgtatatacagattggtgatatggag
actgcccttggtttgttccgaaggttgcctgttaaggatgcttcaagttggaatacaatc
attagagggcatctacaaaatgacaactatggtattgcaatggagcttctgtatgaaatg
gtcaaaagtggaactgctcttagcaaagaaactttctccatagcctttggtttagtagct
tcgttaacagcattggatttaggaatgcaaattcatggccggctgctacggagtggaatt
catcatgatggctttttgagaaactcacttgttgatttttattccaagtgtggggaaatg
gagaaggcttcatttgtttatcaaggatttcctaaatgtaatgcaagtgaccggtgctcc
aaaaataataacaagtcactgcctcattctttttcacaaagttcaatggttactggttat
gttcaaaacggaaagttgcaagaagctttaaagatgttcactacaatggtcactgatagg
tttgaggtggacaagtttacacttacaagcattgttaccggttgtgctaatgctggtctt
ttggagcttggccagctgattcatgctcagatcgtgaaagccggtcaaccttttgatatt
ttcttaagttcctcgatgattgacatgtatgctaaatgtggagaactagatgatgcttgg
tcaatatttagagaaacaaaagttcggaatactgtgttgtggacttcagttatatctggt
tatggcttacatgggcgtgggagggatgctattcagatgttcaattggatgttagcagag
ggtataaaaccaaatgaaattagtttcgttggactcttaactgcatgtagtcatgcaggt
ttgttaaatgaaggcatccactattttatggtaatgaaagaagaatttggcatcaaacct
caagttgaacatttcacttgtatggtagatttgtttgggcgttctggccgtttagacgac
ataaaggatttcatttcaaagaataagatctcaaatgtcgcttcagtttggagatcattc
ttgtcctcctgccgaattcacagaaatatagagatggcaaagtgggtttctgacaaactc
tttgaacttgagccaccaacagctggatcttatattttgttatcaaacacgtgtgcttct
ggtgacaaatgggatgatgttgctcaagtaagaggtttgatgaaagatatgggacttatg
aagcaccctggtcaatcttggatccagttgaaaaatcaagtccacagttttgtcatgggg
gataggtcacatccagaagaagctgcaatttattcttacttgaacgagctaattcaaaga
ctaaaggaaattggttatttaactgaagcgaatattgtgatgcaagatgttgaagaagaa
caaaaagaattacttcttgcatttcacagcgagaaaattgctatagcttatgccctcatg
aaaactagcactggatcacctattcgaattatgaaaaacctacgagtttgtaccgactgt
catagcttcatgaagtgtacgtctttacttttagaaagagaaattgttgttcgagattta
cgccgctttcatcatttcatttcaagcacggtcactgttcttgtggagattattggtaag
gtgaggatgatctacaatgcatgtgaactttttcataaagtttctcaatatttggaaact
tgtggattttattgtcaccaataa
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