Daucus carota (carrot): 108200690
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Entry
108200690 CDS
T05350
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108200690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108200690
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108200690
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Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108200690
NCBI-ProteinID:
XP_017224419
UniProt:
A0A175YIT1
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Position
9:40715202..40717590
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AA seq
620 aa
AA seq
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MNEREKGKKLMHSASSVCISVNSPSSSNREFHDGHDKDPRGWARRIFSSLYQFIPGIMHP
HAKSVQRWNKIFIFSCLFTGILDTLFLFLLYSKKDNMCIAVNLTMTQVLIVLRSQANIIY
MFHMLLQFRLAYFARKSRILVQHPKKIALNYLYGYFLVDFFVVLPLSQVIMWLVLQKYKG
SSGAKDAVIFLQVGINFQYLAMFFRILLMVVGQSTSSVLFESWLAKFVLNILGFVLFSHV
IGSCWYLFALQRVTQCLRNACGELWCFPYIYCGDGNTKGRLEDDPTSWEKWKDNKKASAC
FGPFGPGESHYGIYVQAVSLTTKSNLPIRYIYSLFWGFQQISTMAGNQIPAFVVGEVLFT
MSITATGLVLFSLLVGNMQNFLQAVGRKSLEMSVRRLDIEQWMSHRKVPEELRKKARESE
RYNWSATRGLNESTLLENLPEDLQRDIRRHVYNFVERFPIFGLMDDSILDAIRERLKHKT
YIKGSKIFVRGGLIDKMIYIVQGKVESIGEDNNSVLLSEGDVCGKELITLCLEHFARDRI
GKKIKIPADKLLSNRMVRCLTNVEAYAIRAADLEEVASLYSGLQTRDPTLQGVTRKESAY
TQGRGANRIKLAWRCRKKQP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacgagagaaaggtaagaaattgatgcatagtgcatcatcagtgtgcatttca
gttaactctccaagctccagtaaccgtgagttccatgatggccatgacaaagatcccaga
ggatgggcaaggagaattttttcttcactgtatcaattcattccagggatcatgcatcct
catgctaaaagtgttcaaaggtggaacaaaatttttattttctcgtgtttatttactggt
atattagacacactgttcctctttctgctatactcaaagaaggataacatgtgcatagca
gttaacctgaccatgacacaagtacttatcgttcttcggagccaagctaatatcatttac
atgtttcacatgcttcttcagtttagattggcttattttgctcgtaaatctagaatattg
gttcaacatccgaaaaaaatagctctcaattacctttatggatactttcttgttgatttc
tttgttgtcttacccttgtctcaagtgattatgtggttggttctccaaaagtataagggt
tcttctggagcaaaagacgcagttatttttttgcaagtaggaatcaattttcagtatctg
gccatgtttttcagaattctacttatggttgttggccagtccacaagcagcgtcctattt
gagtcttggttagccaagtttgttttaaatatactcgggtttgttctctttagtcacgta
attgggtcatgctggtatctctttgcattacagagggtaacacaatgtcttagaaatgct
tgtggtgagctctggtgcttcccttatatatattgtggggacggaaacacaaaagggaga
ttagaagatgatccaacatcatgggaaaagtggaaggacaacaaaaaggcttctgcttgt
tttggaccttttggtccaggtgaatcccactatggaatctacgtgcaagctgtcagtctt
acgacaaaatctaatttacctataagatacatatattcactattttgggggttccagcaa
attagtactatggctggaaatcaaattccagctttcgttgtgggggaagttcttttcact
atgtctatcaccgctacaggtcttgttctcttctctcttcttgtaggaaatatgcagaac
tttctccaagctgtgggacgcaagagtttagaaatgtctgtaaggcgtttggatattgag
caatggatgagccacaggaaggtgcctgaggaacttagaaagaaagcccgtgaatcagaa
aggtataattggtctgccaccagaggcctgaatgaatcaacgctattggaaaacctacct
gaagaccttcaaagagatatacgtcgacatgtctacaattttgtggaaagatttccaatc
tttggtctgatggatgactccatcctggatgccatcagggaaagactgaaacataaaaca
tatattaaaggaagcaaaatttttgttcgcggaggtctaattgataagatgatttacatt
gttcaaggaaaggttgagagcattggagaagacaacaatagtgtacttctgtctgaaggg
gatgtatgcggcaaggaacttattaccctgtgcctcgagcattttgccagagacagaatc
gggaaaaaaattaagattccagcagacaaattgctaagcaatagaatggtaagatgctta
actaatgtagaagcatatgcaatccgagctgcagacctggaggaagtcgccagtctttac
tctgggcttcaaactagagatcctactcttcaaggtgtcactaggaaggaatcagcttac
acgcagggtcgtggagcaaatcgtattaaacttgcgtggagatgtaggaaaaagcagccc
taa
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