Daucus carota (carrot): 108200731
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Entry
108200731 CDS
T05350
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108200731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108200731
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108200731
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108200731
NCBI-ProteinID:
XP_017224466
LinkDB
All DBs
Position
9:complement(529434..537192)
Genome browser
AA seq
887 aa
AA seq
DB search
MIMDSPNSSSLQQSSTNDAYAKRNKRKASEDATSITPNPFFSCNFTVGDLLKELDMGRYG
NVTDIMNSLLEDRMSSLKPFYKLLPESACSRSIEDSRDTSTESGEKSVKLKNGANCGKVS
QHIVIIDSDEEEVEDQAPVQPCQDVLFSKTFPSSAPKAMADGDAGFVGATNIKKYDSMHA
LGNDDFTDETEQPSPVAGTLVEKDKGIYIGVEDSSTDEDDQHSYNNDDALGDIWQEMSFA
MESCKDTSVNPASDEYVTDEEEDCEHSYILKDDIGYVCRICGVIQKRIESIIEYQYAKRT
STRTYKYEDRSSRDEEANDILPGEVRSAGFDFVETDICVHPRHSKIMKPHQIEGFNFLAR
NLLTDNPGGCILAHAPGSGKTFMIISFIQTLMAKYPSARPLVVLPKGVLPTWKKEFLLWQ
IEDISLLDFYSVNANSRSQQLEVLKQWVEKRSILFLGYVQFSSLVSNPNTDEITAACQKI
LLKQPSVLIMDEGHTPRNENTDQLAALQSVQTPRKVVLSGTLYQNHVEEVFNILNLVRPR
FLKMEVCKGPKRHILSIIETRKKGNLLKKSDHEFYEMVEESLLKDGDLNRKALIIQCLRE
MTSKVLHYYKGDSLDELPGLVDFTVFLNLSPRQKREVIELKKLGGRFKISSDGGSIYVHP
KLKDLLKSTAGKKRFDQVNIDKMLNKLDINEGVKAKFYLNLLRLCESTEEKLIVFSQYLP
PIKFLERLTVKVKGWTPGKEIFMITGDLDNDVRELNMERFNNSPDSKVFFGSIKACSEGI
SLVGASRIIILDIHLNPSVTRQAIGRAFRPGQVRKVYTYRLVAAGTLEQEDHYTSFKKES
IPKLWFEWNGACRAEDFQLEKVNVTNCGDNFLETPRLHEDVITLYRR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgattatggactctccaaattcatcctccttgcagcagtcatcaactaatgatgcatat
gcaaagaggaacaagcggaaagctagtgaagatgcaacatctatcacgccgaaccccttt
ttttcttgtaattttacagtaggtgatctcttgaaggagcttgatatgggtagatatgga
aatgtaactgatatcatgaacagccttttagaagatagaatgtcttcactgaagcccttt
tataagctgttaccagaatctgcctgcagcaggtctattgaggattccagagacacaagt
actgagtcaggagagaaatcagtcaaactgaagaatggagctaactgtggtaaagtctca
caacacatagtaattattgattcagatgaggaggaagttgaagaccaggcccctgtccaa
ccatgtcaagatgtccttttcagtaaaacgtttccttctagtgctccaaaggctatggca
gatggtgatgcaggctttgttggtgcaacaaatattaaaaaatatgacagcatgcatgcc
ctagggaatgatgatttcaccgatgaaactgaacagccaagccctgtcgctggaacgtta
gttgaaaaagataaaggcatttatattggcgtagaggatagttcaactgacgaggatgat
caacattcatacaataatgatgatgccctgggtgatatttggcaggagatgtcatttgca
atggaatcttgtaaggatacctctgtaaatcctgcatctgatgagtatgtaactgatgaa
gaagaagattgtgaacattcatatatcttaaaggatgatatcggctatgtttgtcgtatc
tgtggagttattcagaaaagaatcgagtccataattgaataccagtatgcaaagagaaca
agtaccagaacatataaatatgaagaccgctcttctagagatgaagaagccaatgacatc
ttgcctggtgaggtgaggtctgctggatttgattttgttgagactgatatctgtgttcat
ccaagacacagtaagatcatgaaacctcatcaaatcgaaggctttaatttcttggcgagg
aaccttttaactgataatccaggtggctgcatactggcccatgctccaggatctggaaaa
acttttatgataatcagttttatacagactttaatggcaaaatatccctcagcaagacca
ctcgtggtgctaccaaaaggtgtcttgccaacttggaagaaggaatttctgttatggcaa
attgaggatatttctttactcgatttttactctgtgaatgctaatagtagatctcagcaa
ctagaagttttaaaacaatgggttgagaaacgaagcattctctttctaggatatgtgcaa
ttttcttcacttgtgtcaaatccgaatacagacgaaatcactgctgcctgccaaaaaatt
cttttgaagcaaccatcagttctcatcatggatgaaggtcacacacctagaaatgaaaat
actgatcagttggctgcccttcaaagtgtccagacacctagaaaagttgttctttctggc
acactttaccaaaaccatgttgaagaggtcttcaacattctaaatcttgtgagaccaagg
ttcttaaagatggaagtatgcaagggtcctaaaaggcatatcttgagtataatagaaacc
agaaagaaagggaatctactgaagaaaagtgatcatgagttttatgagatggtagaggaa
tcactcctaaaggatggcgacctcaaccgaaaggcacttatcatacaatgtcttagggaa
atgactagcaaggttcttcactactacaaaggtgattcgcttgatgaactacctggcctt
gttgatttcacagtgtttctcaatctaagcccgcgacagaaacgtgaagtaatagaactg
aaaaaattaggaggaagatttaagattagctctgatggaggctcaatatatgtacaccca
aagttaaaagatcttttaaagagtactgcagggaaaaagagatttgatcaagtaaatatt
gataagatgctgaataaattggatataaacgaaggagtgaaagccaagttttatcttaat
ctgcttcgtttgtgcgagtcaactgaagaaaaacttattgtcttcagtcaataccttcct
cctataaaattcctagaaagattaacagtgaaggttaaaggttggactccgggaaaggag
atctttatgatcacaggtgatcttgataatgatgttcgagaactgaacatggaacgcttt
aacaactccccagattccaaagttttcttcggatctatcaaagcttgtagtgaaggtata
tcacttgtgggggcttcaagaataataatactagacattcatttaaatccatcagttact
cgccaggcaattgggcgtgcattccgaccaggtcaagtaagaaaggtgtacacctaccgc
ctggtagctgccggaacactggaacaggaagatcattacacttcatttaagaaggagtct
attccaaagctgtggtttgaatggaatggggcttgccgtgcagaagatttccagctggag
aaagttaatgtcacaaactgtggcgataactttctggaaaccccgagattacatgaagat
gttatcactctttacagaaggtaa
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