KEGG   Daucus carota (carrot): 108200833
Entry
108200833         CDS       T05350                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108200833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108200833
   03036 Chromosome and associated proteins [BR:dcr03036]
    108200833
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108200833
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108200833
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR75_2nd GH18_BT1044-like Beta-prop_BBS7
Other DBs
NCBI-GeneID: 108200833
NCBI-ProteinID: XP_017224616
UniProt: A0A162B2F9
LinkDB
Position
1:26924013..26931078
AA seq 345 aa
MSFGVADTNPNKSFEVTHPPTDSVSSLSFSPKANYLVATSWDNQVRCWEVMRNGNNLGTV
PKAQISHEQPALCSTWKDDGTTVFTGGCDKQVKMWQLSSGGQPVTVGMHDAAVKDLAWIP
EINLLVTGSWDKTLRYWDLRQPNPAHVQALPERCYALTVRHPLMVVATADRNLIVYNLQN
PQTEFKRISSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDSQQTKNFTFKCHRDGN
DIYSVNALNFHPVHHTFATAGSDGTFNFWDKDSKQRLKAMSKCSNPIPCSAFNNDGSIYA
YAVCYDWSKGAENHNPSTAKTCIYLHATQEAEVKAKPRVTTGGRR
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtcgttcggtgttgctgatacgaatccgaataaatcgttcgaggtgactcatccgccc
actgactctgtgtctagcctctcttttagccccaaggcaaattaccttgtggcaacttca
tgggataatcaggtgcgatgctgggaggtgatgaggaatggaaacaatctcggtactgta
cccaaggcacaaatctcacatgaacagccggctttgtgctcaacttggaaagatgatgga
acaacagtttttactgggggctgcgacaaacaagttaagatgtggcaactatcttctggt
ggccagccagtaactgtgggcatgcatgatgccgctgttaaggatcttgcttggattcct
gagattaacctattagtaactggaagctgggataaaactctaagatactgggatctccga
caacctaatccagcacatgttcaagcacttcctgaacgctgctatgctcttacagtaaga
catcctctgatggtggttgccacagcagatagaaatcttatagtttataacttgcagaat
cctcagactgagtttaagaggataagttcgcctctgaagtaccagactaggtgtgttgct
gccttcccagatcagcaaggtttcttggttgggtcaattgaagggagagttggtgtccat
catcttgatgattcacaacaaactaaaaacttcactttcaaatgtcatagagatgggaat
gatatctactcagtcaatgctttgaattttcatcctgtacatcacacatttgcaactgct
gggtctgatggcacttttaatttttgggacaaagatagcaaacagaggcttaaggctatg
tcaaagtgcagtaatcctattccatgtagcgctttcaacaatgatggttcaatatacgca
tacgcagtatgttatgattggagcaagggtgcagaaaatcataatccatccacagctaag
acctgtatatacctacatgcgacacaggaggctgaggtgaaggccaaaccacgagtgaca
accggaggaagaagatga

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