Daucus carota (carrot): 108200833
Help
Entry
108200833 CDS
T05350
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108200833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108200833
03036 Chromosome and associated proteins [BR:
dcr03036
]
108200833
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108200833
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108200833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR75_2nd
GH18_BT1044-like
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
108200833
NCBI-ProteinID:
XP_017224616
UniProt:
A0A162B2F9
LinkDB
All DBs
Position
1:26924013..26931078
Genome browser
AA seq
345 aa
AA seq
DB search
MSFGVADTNPNKSFEVTHPPTDSVSSLSFSPKANYLVATSWDNQVRCWEVMRNGNNLGTV
PKAQISHEQPALCSTWKDDGTTVFTGGCDKQVKMWQLSSGGQPVTVGMHDAAVKDLAWIP
EINLLVTGSWDKTLRYWDLRQPNPAHVQALPERCYALTVRHPLMVVATADRNLIVYNLQN
PQTEFKRISSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDSQQTKNFTFKCHRDGN
DIYSVNALNFHPVHHTFATAGSDGTFNFWDKDSKQRLKAMSKCSNPIPCSAFNNDGSIYA
YAVCYDWSKGAENHNPSTAKTCIYLHATQEAEVKAKPRVTTGGRR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggtgttgctgatacgaatccgaataaatcgttcgaggtgactcatccgccc
actgactctgtgtctagcctctcttttagccccaaggcaaattaccttgtggcaacttca
tgggataatcaggtgcgatgctgggaggtgatgaggaatggaaacaatctcggtactgta
cccaaggcacaaatctcacatgaacagccggctttgtgctcaacttggaaagatgatgga
acaacagtttttactgggggctgcgacaaacaagttaagatgtggcaactatcttctggt
ggccagccagtaactgtgggcatgcatgatgccgctgttaaggatcttgcttggattcct
gagattaacctattagtaactggaagctgggataaaactctaagatactgggatctccga
caacctaatccagcacatgttcaagcacttcctgaacgctgctatgctcttacagtaaga
catcctctgatggtggttgccacagcagatagaaatcttatagtttataacttgcagaat
cctcagactgagtttaagaggataagttcgcctctgaagtaccagactaggtgtgttgct
gccttcccagatcagcaaggtttcttggttgggtcaattgaagggagagttggtgtccat
catcttgatgattcacaacaaactaaaaacttcactttcaaatgtcatagagatgggaat
gatatctactcagtcaatgctttgaattttcatcctgtacatcacacatttgcaactgct
gggtctgatggcacttttaatttttgggacaaagatagcaaacagaggcttaaggctatg
tcaaagtgcagtaatcctattccatgtagcgctttcaacaatgatggttcaatatacgca
tacgcagtatgttatgattggagcaagggtgcagaaaatcataatccatccacagctaag
acctgtatatacctacatgcgacacaggaggctgaggtgaaggccaaaccacgagtgaca
accggaggaagaagatga
DBGET
integrated database retrieval system