Daucus carota (carrot): 108200866
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Entry
108200866 CDS
T05350
Name
(RefSeq) heat shock cognate 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
dcr04141
Protein processing in endoplasmic reticulum
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108200866
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108200866
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108200866
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108200866
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108200866
03009 Ribosome biogenesis [BR:
dcr03009
]
108200866
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108200866
04131 Membrane trafficking [BR:
dcr04131
]
108200866
03051 Proteasome [BR:
dcr03051
]
108200866
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108200866
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108200866
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108200866
Spliceosome [BR:
dcr03041
]
Complex B
Other components
Prp19 complex
108200866
Complex C
Prp19-CDC5 complex
108200866
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108200866
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP70 / DNAK
108200866
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108200866
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108200866
Proteasome [BR:
dcr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108200866
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108200866
Exosome [BR:
dcr04147
]
Exosomal proteins
Proteins found in most exosomes
108200866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Acetyltransf_14
PilM_2
FGGY_C
Hydantoinase_A
SGSH_C
Motif
Other DBs
NCBI-GeneID:
108200866
NCBI-ProteinID:
XP_017224621
LinkDB
All DBs
Position
9:complement(33352679..33361677)
Genome browser
AA seq
626 aa
AA seq
DB search
MAKNEVAVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERFIGDAARNQS
ALNLVNTVFDAKRLIGRRFCDSTVQSDMKLWPFKVVGDNGDKPKIVVNYKGEERRFSPEE
LSSMVLLKMKEIAEEYIGKKVKNAVVTVPAHFNDSQRQATKDAATIAGLNVLRLLVEPTA
AAVAYGLDKNLTSGMEGEKTVLIFDLGGGTFDVSVLKIKKDNIEVLATGGDTHLGGEDFD
NRLLDHFVKEFKRKYGKDISRNAKSLRRLRNACEKAKRILSHNATTSQCILYIDIDSLYE
GIDYSTKITRARFEDLNLDLFRSCLDTVEKCLEDAEMDQSSVDDVVLVGGSTRIPKVQQL
LQQFFDGKELCKNINPDEAVAYGAAVQAATLSGEGHEKIKNLVLLDVTPLSLGIAVKGIL
MSVIIRRNTTIPTSMQEEFCTAFDDQKSVKISVYEGERTRTEDNNLLGEFELYGLPPGPR
GKVKILVTFTIDANGVLSVSAENEDTGLRKSIKIKKSGTLTAAEIERMVRDAERFKVEDE
EFRRKIRAMQAFEDYVYNTRDNTDGNYSLKASVKKMISYSIKEAIEWLDANRDAEEYEYQ
YKKQQFEAMCNHLIPGMGGIRIEEVE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaatgaagtagcggttggaatagacctaggcacaacatactcgtgtgttggt
gtttggcaaaatgatcgagttgaaatcattgcaaatgatcaggggaaccgcactacaccg
tcctatgttgctttcactgatacggagcgtttcattggcgatgctgctcggaatcagtct
gctttgaatcttgtcaatactgtattcgatgctaaaaggttgattggaaggaggttttgt
gattcgacagttcaaagtgacatgaagctgtggccatttaaggttgttggtgacaatggt
gacaaaccgaaaattgttgtgaattacaaaggtgaggagaggcgattctcccctgaggag
ttgtcttcaatggttcttctgaagatgaaggagattgctgaagaatacattggaaagaaa
gtgaagaatgctgttgtcacagtccctgcgcacttcaatgactcgcagcgccaggctacc
aaagatgcagcaacaatagctggccttaatgtgttgcggcttcttgttgagccaaccgct
gctgcggttgcttatggtcttgataaaaatcttacaagtggaatggaaggcgagaaaact
gttctgatttttgatctaggtggtggtacattcgatgtttctgttctcaaaattaagaag
gataatattgaagtgctagctactggtggagacactcaccttggaggcgaggattttgac
aatcgtttgcttgaccattttgtgaaggaatttaaaaggaagtatggaaaggacatcagt
cgaaatgctaaatctttgagaagattgagaaatgcatgtgaaaaggcgaagagaatactc
tcacataatgctacaacaagtcaatgtatattatatattgatatagattcgttgtatgaa
ggaattgattatagcaccaaaatcacccgagccagatttgaggatttgaacttggacctt
tttaggagttgtttggatactgtggagaagtgcctggaagacgcggagatggatcaaagc
agtgtcgatgatgttgtacttgttggtggatctactagaattccaaaagtgcaacaactg
ttgcagcagttttttgatgggaaagaactttgtaagaacataaatcctgatgaggctgtt
gcctatggtgctgctgttcaagctgctacattaagcggggagggtcatgagaagatcaag
aatttggttctgcttgatgttactcctttgtctcttgggattgcagtgaaaggcatacta
atgtctgtaattattcggaggaacacaacaattcccacttcaatgcaagaagaattttgt
actgcttttgatgatcaaaaatctgttaagatcagtgtttacgagggtgagagaactaga
actgaagacaacaatttacttggagagtttgaactatatggcctgcctccaggcccgagg
ggtaaagttaagattttggtaacatttacaattgatgctaatggggtactaagtgtatct
gctgagaatgaggatactggactgagaaagagcattaaaataaagaaaagtggaacactc
actgcggcagagattgaaagaatggtgagagatgctgagcggttcaaggttgaagatgag
gagtttaggagaaagattagagcaatgcaggcatttgaggattatgtatataacacgagg
gacaataccgatggaaattacagtcttaaagcttctgttaagaagatgataagttattct
atcaaggaggctatcgagtggctagatgcaaaccgggatgctgaagaatatgagtatcag
tacaagaaacagcaatttgaagcaatgtgcaaccacctcattcctggcatgggaggtatc
aggattgaagaagttgaatga
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