Daucus carota (carrot): 108200937
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Entry
108200937 CDS
T05350
Name
(RefSeq) sesquiterpene synthase 2-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
108200937
Enzymes [BR:
dcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
108200937
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Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
KIP1
LMBR1
Zn_ribbon_3CxxC_2
Motif
Other DBs
NCBI-GeneID:
108200937
NCBI-ProteinID:
XP_017224699
UniProt:
A0AAF0XXX0
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Position
9:9136915..9139799
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AA seq
564 aa
AA seq
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MALCVNSVSGPPPKVVPDITRKSASFHPSVWGDKFLAFSTSDVKTDADHKVEERLQVLKQ
EAKKMLTAEDRTQRELISLVDDIQRLGLSYHFEAEIDIILQEINASFHEYYGSTNDDNLH
EFTLSFRLLRQQGHNVSSDVFYKFKDSNGKFKESLVKDVRGMLSLFEATHFRVHGENILE
DALEFTTTHLSLYLNSNIDNPLIGLVGRSLKYPLRKSLNRLVARHYISVYHKLDWHNQVL
LDLAKCNFNLVQKLHQVELGEITRWWKDLDFANKLPFARDRVVECYFWITGVYFEPQYAS
ARTFVTKVITLTSTVDDIYDAYGTVEELDQFTDAIEKWDVRTIDQLPEYMRHCYQALLDV
FSEAEEEMVKEGRPTYGFGYAKEAFKRLTRAYLHEAKWCEIQYFPTLEEYMSVTLVTAGY
KMLSVTSFVLMGNVATREAFEWITKEPLIERAASVINRLHDDIVGHEFEMQRPNIPTAVD
IFMKQYGVSKETTYDALQKRVINAWKDMNQECLYPTAAAMALLTRVVNFACVINLLYDGD
DGYTHSSARTKDMITSILLDPVPV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtgtgttaactctgtatctggtcctcctccaaaggttgtgcctgatattacc
cgcaaatcagcatcttttcatcctagcgtttggggagacaaatttctggcattcagtacc
tcagatgtaaaaactgatgctgatcacaaagtggaagaacgtcttcaagtgctgaaacaa
gaagccaagaagatgctgacagcagaggacaggactcaacgcgaattaatcagcctggtt
gatgatatacagcgactgggattgtcttaccactttgaggctgagattgacataatacta
caggagataaatgcaagttttcatgaatattatggaagcacaaatgatgataacctgcat
gaatttactctaagtttccgcttacttagacagcaaggacataatgtttcctctgacgtc
ttctacaaattcaaggacagcaacgggaagttcaaggagagcttggttaaggacgtgaga
ggaatgctaagcttgtttgaagcaacacattttagagtgcatggagaaaacatactagaa
gatgctctggaattcactaccactcaccttagtttatatcttaattccaacatagataat
ccattaataggccttgttggtcgttcactcaagtatcccctccgcaaaagtttaaacagg
ctggtggcaaggcattacatttcagtctaccataaacttgactggcataatcaagtactg
ctagatttggcaaaatgcaattttaacctggtgcagaagctgcatcaagtggagctaggt
gaaattacaaggtggtggaaagatttggattttgcaaataaacttccattcgccagagat
agagtggtggaatgctacttttggattacaggggtgtactttgagccacaatatgcctcg
gctagaacttttgtaaccaaagtgattacactaacatccactgttgatgatatctatgat
gcctatggaaccgttgaggaacttgatcaatttactgatgcaattgaaaaatgggatgtc
cgaaccatagatcagctcccggagtacatgagacattgttatcaagccttactggatgtt
ttttctgaagccgaagaggagatggtaaaggaaggcaggccaacatacggctttggttat
gcaaaagaagcttttaaaaggctgacaagagcatatctgcacgaagctaaatggtgtgaa
atccaatactttccgacgttggaagagtacatgagtgttacactcgtaactgcagggtac
aaaatgttatctgtcacaagtttcgtgctaatgggtaatgtagcgactagagaagcattt
gagtggataaccaaagagcccttaattgaaagagctgcatctgtcattaaccgactccat
gatgacatcgtgggacatgagtttgagatgcagcgaccaaatataccgacagctgttgac
attttcatgaaacaatacggcgtatcaaaagaaactacatatgatgcactacagaaacgc
gttattaatgcatggaaggatatgaatcaggaatgcctgtatccgacagcagcagcaatg
gcattgctgacaagagttgtgaatttcgcatgtgttataaaccttctttatgatggggat
gacggctacacacattcctctgctcggacaaaagatatgatcacctccatcctgttagat
cctgtccctgtataa
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