Daucus carota (carrot): 108201012
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Entry
108201012 CDS
T05350
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108201012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108201012
03051 Proteasome [BR:
dcr03051
]
108201012
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108201012
Proteasome [BR:
dcr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108201012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
108201012
NCBI-ProteinID:
XP_017224791
UniProt:
A0A166FM35
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All DBs
Position
1:complement(1756199..1760267)
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AA seq
613 aa
AA seq
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METQPPPINWSNIVKQPPKPPATKPPIVAPASIAAGSCKSTNGIAVAVVDANAIIQGGEK
LHKMSDKFVSVAEVIDEVRDPRSRHSLNLLPFDVNTMEPSPDSLKKVINFARATGDLQTL
SDVDLKLIALTHMLEAQIHGTKHIRDSPPPMHTVNVKRLPEKDLPGWGSNVPNLEEWEAL
EHAVGDGNGPESRILPLKDLNMNVIPAEDNTSIDDGSVGNAVESHSENKEGFDGGYTKPR
KYFPKKKEVNIEGKMVAAGVDASQGALDNNTDDWLPAVSRSTHRRFLRRKARRETYEESV
EKDIQNDTAKTMDSDKQDSASYQDLVTDQSLNESHLENEIEKSNVTDGDLSTILTQMRLE
EDSSEVIEDGNDVSNPQGPEEVLEVENISEDGVDDEAHEVEHFNLSNQAGESGNVSIADD
NSSEQSWMLRSLSESSVACITSDFAMQNVILQMGLRLVAPGGMQIRELHRWILKCHACYN
VTTEIGRIFCPKCGNGGTLRKVAVTVGENGIIVAARRPRVSLRGTKFSLPMPQGGRDAIT
KNPVLREDQLPQKFLHPKTKKKNKDEDDIFASNHIFLHHTDKKAPLQPPVRKALAVFSGR
RNPNDNHYSRAKH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcaaccaccgccaatcaactggagcaacatcgtcaagcagccgccgaagccg
ccggcgacaaagcctccaattgtagctccggcgagcatcgccgccggaagctgtaagtcg
acgaatgggatcgccgtggcggtggtggacgcaaatgcgataattcaaggcggagagaag
ctgcataagatgtcggataagttcgtttcggtggcggaggttatcgatgaggtgcgggac
ccgaggtcgcggcatagcctcaatttgttgccgtttgatgttaataccatggagccgtct
cctgattctcttaagaaagtcatcaactttgcaagggcaactggtgatctgcagacgctg
tcagatgtcgatcttaagcttattgctttaactcatatgttggaggctcaaatccatgga
acaaaacatatcagggatagccctcctcctatgcacacggttaatgtgaagaggctacct
gagaaggacttgcctgggtggggctccaatgttcctaatttggaagagtgggaagcgcta
gaacatgcagtcggggatggaaacgggcctgaatcgagaatacttccactgaaagatttg
aatatgaatgttatacctgcagaagataatactagtatagatgatggttcagtgggcaat
gcagttgaatctcattcggaaaacaaagagggctttgatggtggttatacgaaaccgagg
aagtattttcccaaaaaaaaagaggttaatatagaagggaagatggtggctgccggagtt
gatgcgtctcagggagcacttgataacaatactgatgattggcttcccgctgttagtcga
agtacacacagaagatttcttagacgaaaggctagacgtgaaacatacgaggaatcggtg
gagaaagatatccaaaatgatacagccaagaccatggatagtgataaacaagacagtgcc
agctaccaggacctggtgactgatcagtctttaaatgaatcacatcttgaaaatgagata
gagaaaagtaatgttacagatggagatctttctactattttgacccagatgaggctggaa
gaagattcatcagaggtaattgaagatggtaatgacgtaagcaaccctcaagggcccgag
gaagtactggaagttgaaaatatttctgaggatggagttgatgatgaagctcatgaggtg
gaacattttaatttatctaaccaagctggtgaaagtggtaatgtatccattgcagatgac
aatagtagcgaacagagctggatgttaagatctctatctgagtcaagtgtggcttgtata
accagtgactttgctatgcaaaatgttattctgcaaatgggtttacgattggtagctcca
gggggaatgcagatacgtgagctacatagatggatcctgaaatgccatgcctgctacaat
gtgactacggaaattggtagaatcttttgtcccaagtgtggtaatggtgggacattgcgc
aaggtagctgttacagttggtgaaaatggcattatagttgcagctcgacgaccgcgtgtg
tccttgcgtggtacaaaattttcactgcctatgccccaaggtgggagggatgcgatcaca
aagaaccctgttttacgtgaggatcaactcccacaaaaatttcttcacccgaagacaaaa
aagaagaataaagatgaagacgacatttttgcctcaaatcacatctttctccaccatact
gataagaaagctccgctgcaaccccctgttagaaaagctctggcagtttttagcgggagg
aggaatcctaatgataatcactactcacgtgccaagcattag
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