Daucus carota (carrot): 108201099
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Entry
108201099 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108201099
KO
K13114
pinin
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108201099
03015 mRNA surveillance pathway
108201099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108201099
03041 Spliceosome [BR:
dcr03041
]
108201099
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108201099
Spliceosome [BR:
dcr03041
]
Complex C
Other components
EJC/TREX
108201099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
108201099
NCBI-ProteinID:
XP_017224896
LinkDB
All DBs
Position
9:complement(4013016..4019052)
Genome browser
AA seq
418 aa
AA seq
DB search
MGSTAVAEKTEEQLRREIIELRRQQREITERLRDPRGIRRGGLSGSGPGNRGFVPGGNRQ
RNFANRNEENQPAPKRRLSSAVVKIEDGEIVDDDDVKDVGNKESAVEEKESIEVVEPSQN
EKMNPTWPRRVVDQRPRMMDSEAPPVPRVLPKDEDPSIVKRNKRMLGQLLGTLERFRKED
AKISGTEAYMRRSDSLKRAEEKAREESEMLRQQEREQIAEKRRRDLTLRARVAAKAEEKE
LEVLFIRWSEHHSKLGKFLRTKAEPPIHYSFAKPLDEDVTSVEQRKEKIFQEWKAARREE
LSQYQKQLAERSVANVEKELERWQNARNTRKGNNDALNLQETMDQELETHRLEHGPKRRK
ISGGSNNEDDDVEDINAGEDDMMDDVLDVDENNGRGEQAIKADTDNGSPAAEKKEEVA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaccgccgttgccgagaagactgaagaacagctccgccgtgaaattattgag
ctacgtcgccaacaacgcgagattacagagaggcttcgtgatcctcggggaattcgacgt
ggtgggttatcaggttcaggtcctggtaaccgcggtttcgtacctggtggaaatcgacag
cgcaattttgctaataggaatgaggagaatcaacctgcgccaaaaaggcgtctttcttct
gccgtggtgaagattgaagatggggagattgttgatgacgatgatgtaaaggacgtagga
aacaaagaatctgcagtggaggaaaaggaaagcattgaagttgtcgagccgagccagaat
gagaaaatgaatcctacttggcctaggagggttgttgatcagaggccacgaatgatggat
tctgaagcccctccagttcctcgagtattgccgaaagacgaagacccaagtatagttaag
aggaataagaggatgcttgggcaacttctcggcactttggagcgtttcagaaaagaagat
gcaaaaatttctggcactgaggcatacatgcgaagatctgattctttaaaaagggctgaa
gaaaaagcacgtgaagaaagtgaaatgttgaggcagcaggagcgcgagcaaattgcagaa
aagcggaggagagatttgactcttagagcacgagttgcagccaaggctgaagagaaggaa
ttggaggtgttatttattcggtggagtgagcaccacagcaagcttgggaagtttttaagg
accaaggcagagcctcctattcattactcgtttgccaaaccattggatgaagatgtaact
tcggtggaacagcggaaggaaaagatatttcaagaatggaaggctgctaggagggaggag
ttatcccaatatcagaaacagcttgctgagcgatctgttgccaatgttgagaaggagctg
gagaggtggcaaaatgcaagaaacacccggaagggaaacaatgatgcattgaatttgcaa
gaaactatggaccaagagttggagacccacaggcttgagcatggacccaagagaagaaaa
atttctgggggaagcaacaatgaagatgatgatgtcgaagatatcaacgccggagaggat
gacatgatggatgatgtgctagacgttgatgaaaacaatgggagaggcgaacaagctatt
aaggccgacactgataatggcagtccggctgcagaaaaaaaggaggaagtggcttaa
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