Daucus carota (carrot): 108201215
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Entry
108201215 CDS
T05350
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03030
DNA replication
dcr03410
Base excision repair
dcr03420
Nucleotide excision repair
dcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108201215
03410 Base excision repair
108201215
03420 Nucleotide excision repair
108201215
03430 Mismatch repair
108201215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108201215
03036 Chromosome and associated proteins [BR:
dcr03036
]
108201215
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108201215
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108201215
DNA Replication Termination Factors
ELG1-RFC complex
108201215
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108201215
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108201215
Check point factors
HRAD17(Rad24)-RFC complex
108201215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
AAA_22
COMMD8_HN
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
108201215
NCBI-ProteinID:
XP_017224998
UniProt:
A0AAF0XX82
LinkDB
All DBs
Position
9:complement(9222040..9226247)
Genome browser
AA seq
637 aa
AA seq
DB search
MPPSPPIPRSVSAPDVFVSNHSSHRSASSAQGTSWLKKTSSLLTYTKKESELTEQSLVAL
NKRNEALEDKKASHSSPYYKGLTDFTLDINKEKLPSATSLAIDNHEAISFTSSTRSSFIV
TMQQLGTFCLFFRSKDEKESSSSASTLSSKQQKDIDSDKGKKEDKSSLVESKSTYILSKE
MPMRERVSVITYEPPALQISPPRYKPMTGKSVLPETRSATKASLNEEELSGSVERTYVFT
WADKYRPHNLTEFICNREKAMELKAMANSQDISHFIFEGLPGVGKRTMILALLRETFGAD
KIKARDECMEFYLKGEALSSIEVNVKRSSHHVELNISDLKGYEKHVIVKLINEKCNKSSD
SVLESNLDNCQVIVLHEADKLSSDALLYLRWVLEKYKGYNKVFFCCNEVSKLQPIKTLCR
VIKLLPPSNEEIMEVLDFIAKEEGIELASKVAETITDNSKNNLRQAIRSFEATWRYNATS
QLTEDQEIMTGWEDTIAKVARDIVKEQSPRQLFIIRGELQKLIEYNVSPVFIFKTLVGEL
KRHLDESSQTHVDILFMEARKREGIDCAAFIHSPTEEMCKRKNDPSRKNVHNFMKIEEFI
AKFMSWYKVLLTNTKLQDVKMKGILDDLDPTKGVAIK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaagcccacctattccacgttccgtatcagcccctgatgttttcgtatcaaat
cactcgtctcatcgatccgctagctcagctcaaggaacttcctggttgaagaaaaccagc
agcctgttaacgtatacgaagaaagagtcagaattaacagaacaaagcctcgtggccttg
aacaaaagaaatgaagctttagaggataagaaagcttctcatagcagtccttattataaa
ggccttactgattttactttagacatcaacaaagagaaactgccttctgcaacgagtctg
gcaatagacaaccatgaggccatttcatttacatctagtacacggtcaagttttattgtt
accatgcaacagttgggtacattttgcttgttttttcgcagtaaggatgagaaagagagt
tcatcctctgcttcgacattgtcatcgaagcaacagaaggacattgattcagacaaaggt
aaaaaggaagataaaagtagtttagtggaaagcaagagtacttatatattaagtaaagag
atgcccatgagggagagagtttcggtgataacctatgaaccaccagcattgcaaatatca
ccaccgcgatataagcccatgacagggaaatcagttcttccagaaacaagatcagctaca
aaggcttcgttaaacgaggaggagcttagtgggagtgtggagaggacctatgtgttcact
tgggcagacaagtaccggccacataatctaacagaatttatctgcaatagagaaaaagct
atggaactgaaggccatggctaattcacaagatatcagccacttcatatttgaagggctt
ccaggggtaggaaagcgtacaatgatcctggctttgctgcgtgaaacctttggtgctgat
aaaatcaaggcaagagacgagtgcatggagttttacttgaagggagaagcattaagcagt
atcgaagtaaatgtaaagcgatcatctcatcatgtggaacttaatatctctgacctaaaa
gggtatgagaagcatgtcatagttaaacttatcaacgagaaatgtaacaagtcatcagat
agtgtgttagaatccaatcttgataactgtcaagttattgttctccatgaagcggataaa
ctatcttcagatgcactactatatctaagatgggtattagaaaagtacaagggatataac
aaggtctttttttgttgcaatgaagtatccaaattacagccaattaaaaccctttgtagg
gtaattaagctccttccaccttctaatgaagagattatggaagttctggattttattgca
aaagaagaaggaattgaattggccagcaaggtggctgaaacaatcacagacaactccaag
aataatttacgacaagctatacgttcatttgaggcaacttggagatataacgcgacttct
caactgacggaggaccaggaaattatgacgggatgggaagacactattgcaaaagttgct
agggacatagtaaaagagcaaagcccaagacagctctttattatccgtggagaactccaa
aagcttatagagtacaatgtctcccctgttttcatttttaagactttagttggagaacta
aagaggcacttggatgaatcgtcacaaactcatgtcgacattttgttcatggaagccagg
aaacgcgaaggcattgattgtgctgctttcatccacagtccaactgaagaaatgtgtaaa
agaaagaatgatccatccagaaaaaacgttcataattttatgaagattgaagagttcata
gcaaagtttatgagctggtacaaggttctattgacaaatactaaactgcaagacgtaaag
atgaagggaatacttgatgatcttgatcccactaaaggcgtggcaataaagtga
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