Daucus carota (carrot): 108201639
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Entry
108201639 CDS
T05350
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108201639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108201639
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108201639
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Motif
Pfam:
Ion_trans
Cupin_3
DUF507
Cupin_2
Motif
Other DBs
NCBI-GeneID:
108201639
NCBI-ProteinID:
XP_017225415
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Position
9:<40858589..40860182
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AA seq
442 aa
AA seq
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IFFFILPLARESVEAALVGTRLSVETIGAFLFLQTLAVLWRLLSFFAEPSVGAFFESWSS
KFVANLVAFFLFSHVVGGFWYYFASNRVERCLEEACGEPWCFDYISCEPANYNPNFRINL
TLLSKWKNNKNATACFGPDGYNYGIYVQAVSLMENSNMPVRYIYSLSWGFQQISTLAGNQ
TPSVFVVEVLFTMFITAMGLLLFSFLIGNIQRFLQARGSRSFENSLRGSDIEQWMSHRQL
PDDLKAKIRESERYNWLATRGLNELMLLENLPEDLQRDIRRHLFKFENKLPIVASMDESI
LDAIRERMKHNTYIEGSRVLVRGGLMDKMVYIVQGKLESTSEGETVVPLSEGDVCGAELI
TLCLEHYVLNRDGDKFRIPAGKLVSKRTVRCLTNVEAFTLRAADLEDVFSLYSGLLIQNP
LVQGAITKESLHPKSLLRSRSY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
attttttttttcatattaccacttgcccgagaatctgtggaagccgcacttgtggggacc
agattgtctgttgagacaattggggcttttttatttttgcagactcttgctgtgttgtgg
agactgctatctttctttgctgagccatctgttggcgccttctttgagtcatggtcatcg
aaatttgttgccaatcttgtcgcattttttctttttagtcatgtggttgggggattttgg
tattacttcgcatcaaatagggtagaacgatgtcttgaagaagcctgtggcgagccttgg
tgctttgattatatatcatgtgagcctgcaaattataatcccaacttcagaattaatcta
acgttattgagtaagtggaagaacaacaagaatgctacggcttgttttggtccagatggt
tacaactatggaatttatgttcaggctgtcagtctgatggaaaattctaatatgccggtg
cgatatatatattcactgtcttggggtttccagcaaataagtactctggccggaaatcaa
actccatctgtcttcgtcgttgaagtgctcttcactatgtttatcactgctatgggtctt
ctgctgttttcttttctcattggaaatatacagaggtttctccaagctcggggaagcagg
agttttgaaaattctctaaggggctctgacattgagcaatggatgagccatcgccaattg
ccagacgatcttaaagcaaaaatccgtgaatcagaacgatataattggctggccaccaga
ggtctgaatgaattgatgctattagagaatctaccagaagaccttcaaagagatatacgc
cgacatctctttaaatttgaaaataaactccccattgttgcctcaatggacgagtccatc
ttagatgccatcagggaaagaatgaaacacaacacatatattgagggaagtagagtttta
gtccgtggaggtctcatggataagatggtttacattgttcaggggaagcttgagagtact
agcgaaggtgagactgtagttcctttgtctgagggggatgtctgcggcgcagaacttatt
acattgtgcctagagcattatgttctgaatagagatggagataaattcagaattccagca
gggaaattggtgagcaagaggacggtccgatgcttaacaaatgtagaagcatttacactt
agagctgcagacctggaggatgtcttcagtttgtactctgggcttctcatacaaaatcct
cttgttcaaggtgccattaccaaggaatcgcttcatccaaagagtcttttgcgcagtaga
tcatattaa
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