Daucus carota (carrot): 108202247
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Entry
108202247 CDS
T05350
Name
(RefSeq) putative SNAP25 homologous protein SNAP30
KO
K18211
synaptosomal-associated protein 25
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108202247
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
108202247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF5089
Lipoprotein_6
DUF1192
TPR_24
Calpain_inhib
Motif
Other DBs
NCBI-GeneID:
108202247
NCBI-ProteinID:
XP_017226128
UniProt:
A0A175YGN5
LinkDB
All DBs
Position
9:complement(35022593..35024364)
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AA seq
251 aa
AA seq
DB search
MFGFKKSHKNADASHGMTKDRRTSSEPLPEDTNNHKSNHKSKEELDSMSVQELEGYAVDK
SKETTDSVYNSLRIAEEIRGTATQTLDTLHQQGEQIHRTHQMAADTEKDLAKGEKVLGNL
GGMFSRTWKPKKGKKIDGPVSRDDNDYVSKKNKKEQREKLGIAPNPKGKGSRTPPPESAN
SMQQIENEKMKQDDALDDLSDILGDLKGMAVSMGTEIEKQNKALDHFSDDVDELNNRVKG
ANQRTRKLLNK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtttaagaaatcacataaaaatgcagacgcctcgcatggcatgacaaaggac
agaagaacatcctcggagcctctccccgaggatactaataatcataagagtaatcacaaa
tccaaggaggaactggattccatgtctgtgcaagagttagagggttatgctgtggacaag
tctaaggaaacgacggattcagtctataatagtctgcggattgcagaggaaattagaggt
acggccactcagacacttgatactttgcatcagcaaggggagcagattcataggactcat
caaatggctgctgacaccgaaaaagatctggctaagggtgagaaggttttaggtaacctg
gggggtatgttctcaaggacttggaagccgaagaagggaaagaagatagacgggcctgtt
agtagagatgataatgactatgtaagcaaaaagaacaagaaagagcaaagggaaaaatta
ggcatagctcccaatcctaagggtaaaggctctcgtacaccgcctccagaatcagcaaac
agtatgcagcaaattgagaacgaaaagatgaagcaagacgatgcacttgatgacctcagt
gatatcttgggtgatctcaagggcatggctgttagcatgggaactgaaatagagaagcaa
aacaaagctttagatcattttagcgatgatgtagatgagctgaataaccgagttaaaggt
gccaaccagcgaacgcgtaagctgctcaacaagtag
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