Daucus carota (carrot): 108202390
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Entry
108202390 CDS
T05350
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108202390
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108202390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
TPR_Trm732_C
HEAT_2
mTOR_dom
zf-AD
Motif
Other DBs
NCBI-GeneID:
108202390
NCBI-ProteinID:
XP_017226258
UniProt:
A0AAF1AJT1
LinkDB
All DBs
Position
1:32557945..32583504
Genome browser
AA seq
2052 aa
AA seq
DB search
MAQQSSRLHRLLTLLDTGSTQATRFTAARQIGDIAKSYPQDLNSLLFKVSQYLHSKNWDT
RVAAAHAIGAIAESVKHASLTDLCKCVEKKMLEEEIPGSAEEVVAWPSYDSNFVTGASLR
SYDLNKVLEFGALLASGGQEYDIASENTKNPKERLARQKQNLKRRLGLDVCEQFMDVNDM
IRDEDLIAQKSHSPANDIASQYYKSRSMHNVRQLVTNMVPSFRSRRPSARELNLLKRKAK
INMKDQTKVWGNEADIEEQHIQEVASPKGFRPDFSTHNKVLSDSITDEDGIEDDGDEVWP
FHSFVEQLILDMFDPVWEVRHGSVMALREILTHQGASVGISMPDLGGDCALPSDNKDKST
RITLKREKEIDLNMQVAADEYVSTPKRLKLEDSSSQILDVMIPSSINGCSDGSIKVEASS
MILGSLQANGELTASCVKVEYEPCVGSGGCSSEALDGFKGKSFSESKVSIGKTDLLNVIP
ENCELTKFVKLARHSWLKHSEFLQDCAVRFLCVLSLDRFGDYVSDQVVAPVRETCAQALG
AVFKYMHPKLVFETLNILLQMQCRPEWEIRHGSLLGIKYLVAVRQEMLHDLLDHVLPACK
AGLEDPDDDVRAVAADALIPTASAIISLKGQTLYSIVMLLWDILLDLDDLSPSTSSVMNL
LAEIYSQDQMMSGALDTKKDPGFDLNEAFCADETGVGMNSKENPFMLSVLAPRLWPFMRH
SITSVRYSAIRTLERLLEAGYRKSVSMSTSSFWPSYILGDTLRIVFQNMLLESSDEILEC
SERVWRLLLQCPVEDLDAASKMYISSWIELAATPYGSPLDAKKMFWPVAIPRKSHFKAAA
KMRAVYHEFDASKNITIGSAEGPIPQEKSGDTSISSVKIIVGADMEISVTHTRVVTATAL
GILASKLYEISAEYIVDPLWKTVTSISGVQRQVAAMVVISWFKDINSRSLSDVKGAKSDL
FINLKNWLLNLLACTDPAFPTKDSLSPYAELSRTYAKMRNEANQLFVSVESSGMHKDFMS
SLKFNLQSLTPDDAINFASSVPPVTVNDDAAGEDSVGRPTADDWESLKQRLLTTSGYLKC
VQGNLHVTVCALVAAAVVHMSDLPAKLNPVILPLMASVKREQEEVLQDKAAEALAELIYH
CTARKPSPNDKLIKNICNLTCTDPRETPQVGVLSSSDILENQDFIVTSSSKPKSKTQMVA
SSEDRLKAEGFISRRGSELALKHLCSKFGSTLFDKLPKLWDCLTEILKPVSIEGLTAPDE
HIAQSIDCVNDPQMLINNIQMVCSISPFLDESIRPKLLMLLPGIFRCVRHSHVSVRLAAS
RCITSMAKSMTGNVMGIIIENVITMLGDMTSVHARQGAGMLVTLLVPGLGVELVPYASLL
VVPLLRCMSDCDHTVRQSVTHSFAALVPLLPLARGLDPPKGLSEGLSKNTEDANFLEQLV
DNSHIEDYNLATELKVTLRRYQQEGINWLAFLKRFNLHGILCDDMGLGKTLQASAIVASD
IAEHRNSDDNGHPSSSLIICPSTLVGHWVFEIEKFIDASVITTLQYVGSAQERVSLSSQF
DKYNVIVTSYDVVRKDIDTLKQVLWNYCILDEGHIIKNPKSKITCAVKQLKAQHRLILSG
TPIQNNVLDLWSLFDFLMPGFLGTDRQFQATYGKPLLASRDSKCSAKDAEAGALAMEALH
KQVMPFLLRRTKAEVLSDLPEKIIQDRYCDLSNVQLKLYEQFSGSQVREDITSMVKVNEA
DHGEEIASSKASSHVFQALQFLLKLCSHPLLVVGEKTPDSLIKLLPDHFPAGADIASELH
KLHHSPKLVALQQILEECGIGLEASSSEGSLNVGQHRVLIFAQHKAFLDIIEKDLFHAHM
KTVTYLRLDGSVEPEKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLTSADTLVFMEHDWN
PMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSVANAIINADNASLKTM
NTDQLLDLFTSAESKKGATMSKTSDMNVDSESKLPGTGKGLKAILGGLEELWDQSQYTEE
YNLSHFLARLNG
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaatcgtcgcggcttcataggctgcttactttactggacactggctctaca
caagcaacaaggtttacagcagctcggcagataggggatattgcaaaatcatatccacag
gacttgaactccctgttatttaaggtttctcaatacctccatagtaaaaactgggatact
agagttgctgctgctcatgccatcggagctatcgctgagagtgtcaagcatgcatcgttg
actgatctctgtaagtgtgtcgaaaagaagatgttagaggaagagattcctggttctgca
gaagaagttgttgcatggcccagctatgattctaattttgttaccggggcttctttaaga
agctatgacctgaacaaggtgttggagtttggggcactgttagcatctggtgggcaggag
tatgatattgcaagtgaaaataccaagaacccaaaggagagattagctagacaaaaacag
aatcttaagaggcgactgggtttggatgtgtgcgagcagttcatggatgtcaacgatatg
attagagacgaagatcttattgcgcagaaatctcactctcctgcaaatgatatagcgtca
caatattataagtcaagatcaatgcataatgtcaggcaactagttacaaatatggttcca
agtttcagatctaggaggccaagcgctagagaattgaatcttttgaaacgcaaagccaaa
attaatatgaaagaccaaacaaaagtttggggcaacgaggctgatatagaggaacaacat
attcaagaagtggcttcacctaagggatttcgtccagacttttcgacccataataaggta
ctttcagattctattactgatgaagacggcattgaggatgatggagatgaggtctggcct
ttccatagctttgttgaacaactcattcttgacatgtttgatcctgtttgggaggttcga
catggcagtgtcatggctttgagagaaattttaacgcatcaaggtgcttctgtggggatt
tcgatgcctgacctcggtggtgattgtgcgttgccctctgataataaagataaaagtacc
agaattacattgaagagagagaaagagattgatttgaacatgcaagttgcagcagatgag
tatgtgtctactccgaagagactaaagctggaagactcatcatcccagattttagatgtg
atgattccaagcagcattaatggttgctctgatgggagtataaaagttgaagctagtagt
atgattttgggttctctgcaggctaatggcgagcttactgctagttgtgtaaaggtggag
tacgaaccttgcgttggaagtggtgggtgttcatccgaagctctggatgggtttaaagga
aaaagtttttcagaaagtaaagtctccattggaaagactgacttgctaaatgttatacct
gaaaattgtgagctgacgaaatttgttaagctggctaggcattcatggcttaaacattca
gaatttcttcaagattgtgctgtgcgttttttgtgtgtattgtcacttgatcgttttggg
gactacgtctctgatcaggttgttgctcctgttcgggaaacttgtgcacaagctttaggt
gccgtgttcaagtacatgcatcctaagctagtttttgagactttgaatatattattacaa
atgcagtgtagaccagagtgggaaattcgacacggtagtcttttgggtatcaaatatttg
gttgctgtgcgacaggagatgcttcatgatttgcttgaccatgttcttcctgcatgtaag
gctgggttggaagatcctgacgatgatgttagagcagttgctgcagatgccttaataccc
actgcatctgctatcatctctttaaagggtcaaactttatattctatagttatgctgcta
tgggatatcttgcttgacctagatgatttaagtccatcaactagcagtgtaatgaatctt
ctggcagaaatatattctcaggatcagatgatgtccggagccttggatacaaaaaaagac
cctggatttgatcttaatgaagcattttgcgcagatgaaactggagtagggatgaactcc
aaagaaaatccattcatgttatcggtattggcgccaagattatggccatttatgaggcat
agcattacatcagttcgttattctgctattcgcactttggagcgactgcttgaagctggg
tacagaaagagcgtatctatgtcaacttcttccttctggccatcgtatattttgggtgat
accctcaggatcgttttccagaatatgctgcttgaatccagtgatgaaattttagagtgt
tcagaaagggtttggaggctgcttcttcagtgcccagtggaagacttggatgctgcttct
aagatgtacatatcttcttggatagagcttgcagccactccatatggttcaccgctagat
gctaagaaaatgttttggcctgtagctattcctcgtaaaagtcactttaaagctgcagca
aagatgagagctgtatatcatgaatttgatgcatctaaaaatattaccataggttctgca
gaaggtcccattcctcaggaaaagagtggagatacttccatcagctctgttaagataatt
gtcggtgctgacatggaaatttcagtcacacatacccgagtagttacagcaacagctttg
ggaattttggcatccaagttatatgagatttctgctgaatatatagtcgatcccctatgg
aagactgtcacatctatatctggagttcagcgccaggtagctgcgatggttgtaatttct
tggttcaaagacattaatagcagaagcctttcagatgtcaaaggcgccaaatctgactta
tttatcaatcttaagaattggttgttgaatctgttagcatgcactgaccctgcattcccc
acaaaagattcactttctccttatgctgaactttcgagaacatatgcaaagatgcgcaac
gaggcaaatcaattgttcgtttcagtcgagtcaagtggcatgcataaagattttatgtca
tctcttaaatttaatctgcagagcctgactccagatgatgcaatcaattttgcatcaagt
gttccaccagtaaccgttaatgatgatgctgccggggaagactctgtagggaggccgact
gctgatgattgggaatcgctaaagcaaagacttttaactacttcaggttatttaaaatgc
gttcagggcaacttgcatgttactgtatgtgctctagttgctgcagcagttgttcatatg
tctgatcttcctgcaaaactaaatccagttattttacccttgatggcatcagtgaaaagg
gaacaggaggaagtactgcaggataaggcagctgaggcccttgctgaacttatatatcac
tgtactgcacgcaagcctagtcccaatgacaagctaattaagaatatttgtaatctgacc
tgcacggatccacgtgaaactcctcaagttggagtccttagttcttcagatattcttgaa
aatcaggatttcattgtaactagtagcagtaaaccgaagtcaaaaacccagatggtggct
tctagtgaagatcgattgaaagcagagggatttattagtaggcgaggttctgaacttgca
ctgaagcatttgtgcagtaagtttggttcaacattgtttgataagcttcctaagctgtgg
gactgcctcacagaaatcctgaagccagttagtattgaggggttaactgcaccagatgaa
catattgctcagtctattgattgtgtaaatgatcctcagatgttgataaataatattcag
atggtatgttcgatttctcccttcctggatgagagtataagaccaaagctactcatgctt
cttccaggaattttcagatgtgttcgccattctcatgtatctgttagactagctgcttct
cggtgcattacatcaatggccaaatcaatgacggggaatgtgatgggtatcataattgaa
aatgttattaccatgttgggtgacatgacatctgtacatgccagacaaggagctggaatg
cttgttacgctgcttgttcctggattgggagtggagctggtcccttatgcttctctgtta
gttgttcctctcctaaggtgtatgagcgattgtgatcatactgtgaggcagagtgtcaca
cacagttttgctgcacttgtacctcttcttccactagctaggggactcgacccacctaaa
ggcttaagtgaaggcttgtccaaaaacactgaagatgcaaattttctggagcaacttgtt
gacaactcacacatagaggattacaaccttgccaccgaattaaaagtcacgctaaggagg
tatcagcaggaaggtattaactggttagcatttttgaagcgttttaacctacatggtatc
ttatgtgatgacatgggtcttggtaaaactcttcaagcatcagctattgtagcgtcggac
atagcagaacaccgtaacagtgatgataatgggcatccatcttcttcattgattatatgt
ccgtcgacccttgttggacattgggtctttgagatagaaaagttcattgatgcctctgta
ataactacactccagtatgttggttctgctcaagaacgagtttcgcttagttcccagttt
gataagtacaatgtcattgtaacatcgtatgatgtggttcggaaagatattgatactctt
aaacaggttttgtggaattattgtatattagacgagggacatattatcaaaaacccaaag
tctaaaatcacctgtgctgtaaaacaattaaaggcccagcatcgtctcatactgagcgga
actccaattcagaacaatgtcttggatctgtggtccctttttgactttctaatgccgggg
tttcttggtactgatagacaattccaagccacttatggaaaacccttgctggcatccaga
gattctaaatgctcagccaaggatgctgaagcaggcgcacttgccatggaagcattgcac
aaacaggttatgcccttcctcctacgtcgaacaaaagctgaagtcttgtctgatttgccg
gaaaaaattatccaggaccgatattgtgatctgagcaatgtccagttaaaactttatgaa
cagttttctggttcacaagtaagggaagacattacaagtatggttaaggtgaatgaggct
gaccatggagaagaaatcgcttcgtcaaaagcatcatcccatgttttccaggcacttcag
ttcttgctaaaactttgtagtcatccgttgctcgttgttggtgaaaagactccagattct
ctcattaagcttctgccagatcacttccctgcaggtgctgatattgcttcagaacttcat
aagcttcatcactctccaaaactagttgcccttcagcaaattttggaagagtgtgggatt
ggtctggaagcatcaagttctgaaggctccctaaatgtcggacaacacagagttctaata
tttgctcagcacaaggcctttctggacataatagaaaaggatttgtttcacgcccatatg
aagactgtcacatacttgcggctggatggctcagttgaaccagaaaagcgttttgatata
gtaaaagctttcaactcagatcctactattgatgccttgctgcttactacgcatgttggc
ggtcttggtcttaatctgacatcagcagacacccttgtttttatggagcatgactggaac
ccaatgagagatcatcaggcaatggacagagcacacagattgggccagcgtaaggttgtc
aatgttcatcgtctcatcatgcgaggaactttggaagagaaagtaatgagtctgcaaaag
tttaaggtgtcggtcgcaaatgctatcatcaacgcagacaatgctagtcttaaaacaatg
aatacagatcagttacttgatctatttacatcagccgaaagcaaaaagggagctactatg
tcgaagacatctgatatgaatgttgatagcgagtctaaattacctggaactgggaagggg
ttaaaagcaatacttggtggactggaggagctttgggatcaatcacaatatactgaagag
tacaacctgagccacttcctagccagactgaatggctaa
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