Daucus carota (carrot): 108202453
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Entry
108202453 CDS
T05350
Name
(RefSeq) clustered mitochondria protein
KO
K03255
protein TIF31
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dcr03012
]
108202453
Translation factors [BR:
dcr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108202453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
GSKIP_dom
TPR_2
TPR_MalT
TPR_1
TPR_9
TPR_7
Motif
Other DBs
NCBI-GeneID:
108202453
NCBI-ProteinID:
XP_017226327
LinkDB
All DBs
Position
9:complement(10354963..10368700)
Genome browser
AA seq
1443 aa
AA seq
DB search
MAGKSNKGRNKKGSHHPVEPAVSAEVTGSDKFTEPVVSADPIGNDKSSTELLKAVENGGV
TVSEVNTTEHEVKESNDQNAENPEKQGESQLYTVPVKTQGREKKLDLQLSPGDSVMDVRL
FLLDAPETCFVTCYDLLFHAKDGTVHHLEDYHEISEVADVTSGGCSLEMVAALYDDRSIR
AHVHRTRELLSLSTLHSSLSTSLALQHEAAKNAPASAGESNKAEVSELESLGFMEDVSDS
LANLLSSPSKEIKCVESIVFSSFNPPPSYRRLVGDLIYLDVVTLEGNTYCITGNTRTFYV
NSSSGDRLDPKPSKNASESTTLVELMQKISAKFKTAFDEILKRKGSAHPFENVQSLLPPN
SWLGLYPVPDHKRDAARAENALTLSFGSELIGMQRDWNEELQSCWEFPHSTPQERILRDR
ALYKVTSDFVDAATSGAIGVISRCIPPINPTDPECFHMYVHNNIFFSFAVDADIEHLPRK
QSLDNNLKSEKTSQSQMTGTVDNMSDGSITINGDKSSGENREDVIPEVAVEAQLAESEQA
TYASANNDLKGTKSYQEADVPGLYNLAMAIIDYRGHRVVAQSVLPGILQGDKSDSLLYGS
VDNGKKICWNEEFHSKVLEASKRLHIKEHTVLDGSGSVFKLAAPVECKGIVGSDDRHYLL
DLMRVTPRDANYTGPGSRFCVLRPELIAAYCQAKEIEQSKSKAKLEDSTAVSEPSKVEDG
EAQVEEKPAVSEPSKVEDGEAQVEGKLDAGVADAETQNIPEGEKVAAEECGSGHDAGTKS
CTEILFNPNVFTEFKLAGSQEEIQADEESVRKVSLYLKDVVLPKFNKDLCSLEVSPMDGQ
TLTDALHAHGINVRYIGKVADGAKHLPHLWDLCLNEIVVRSAKHIFKDFMRNSEDHELGP
AMARFLNCLFGNCQPISGKGVASGTKARTPNKASGKSTRGHGRLKQGVSAERKPMPYTSV
TSDSLWSDILEFAKVKYQFDLPEDARSRVKKISVIRNFCQKVGLAVTSRKYDLAAALPFS
PSDIINLQPVVKHSIPVCSVAKDLVETGKIQLAEGMLGEAYSLFSEAFTILQQVTGPMHR
EVANCCRYLAMVLYHAGDMAGAIMQQHRELIINERCLGLDHPDTAHSYGNMALFYHGLNQ
TELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDTGKMQTALRYLQEALKKNERL
LGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEEDSRSRDSQNWMNTF
KMREVQMTAQKQKGQTLNAASTQKAIDILKAHPDLIHAFQAATASNYASGSVNKNLNASV
VGEAFPRGRGVDERAARAAAEARKKAAARGLLIRPHGVSVPVQTLSQLPEIYNLINPGLT
PNVPKPEEADKAKKVNGHPPRGSGNAQDGEVKVEKRAETPAGLGAGISALGPEKKKSKAK
VAA
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaaatcaaataaaggaaggaacaagaaaggatcacaccatcctgtagaacct
gctgtttcagcagaggttactgggagcgataagtttacagaacctgttgtttcagcagat
cctattgggaacgataagtcatctacagaattattaaaagctgttgagaatggaggggtc
actgtgagtgaagtgaatacaactgagcatgaggtcaaggagtcaaatgatcagaatgca
gaaaacccggaaaagcaaggtgagagtcaattatatactgtgccggtcaagacacaaggc
agagagaagaagctggacctacaattgagccctggcgattctgtgatggatgtaagactg
ttccttctcgatgctcccgagacctgttttgttacatgttacgacttgttgtttcatgct
aaggatggtaccgttcatcatctggaagactaccatgaaatatctgaagttgccgatgtt
acttcaggcggatgttccttggagatggttgctgcactgtatgatgatagatccattagg
gctcacgttcaccgtactagagaacttctttctctttcaactctgcactcctcgttatca
acttcacttgctttacaacatgaggcggcaaaaaatgcacctgcaagtgctggagaatca
aacaaagctgaagtatcagaacttgagagtttgggttttatggaggatgtatctgattca
cttgccaacttgttgtcgtctccttccaaagagatcaaatgtgtggaaagtattgttttc
tcttcatttaatcctcctccaagctatcgaaggcttgtcggggatttgatttacctggat
gtggtgacactggaagggaatacatactgcattactggtaacacaagaacattttatgtt
aattctagctcaggggataggcttgacccaaaaccaagtaaaaatgcttcggagtcgact
actcttgttgagctgatgcaaaaaattagtgccaagtttaagacagctttcgatgaaata
ctgaagcggaagggctctgcgcatccttttgaaaatgtccagtcccttttgcctcctaat
tcctggctaggattgtaccctgttcctgatcacaagcgtgatgcagctagagcagagaat
gcacttacactgtcatttggaagtgagttgattggaatgcaacgagactggaacgaagaa
ttgcagtcttgttgggaatttcctcattcaactcctcaggagaggattttgagggatagg
gctctctacaaagtgacttcagactttgttgatgctgctacaagtggggctatcggggtc
atcagcagatgcattccaccaataaatcccacagatcccgagtgctttcacatgtacgtt
cacaacaatatattcttcagtttcgctgttgatgcggacatagagcatcttccccggaaa
caatctttggataataatttgaagagtgagaaaacaagtcagtcacagatgactgggacg
gttgacaatatgtcagatggatctatcacaattaacggagataaatcaagtggtgaaaat
cgggaagatgttattccagaggtagctgttgaggcacagttggctgaaagcgagcaagcg
acttatgcatcagcaaataatgatctgaaaggcaccaagtcatatcaagaagctgatgtt
cctggtctttataatcttgctatggccataatagattatagaggtcacagagttgtagca
cagagtgtactacctggcattcttcaaggcgataagtctgactcactcttgtatggttct
gttgacaatggaaagaaaatatgctggaatgaagaatttcattccaaggttcttgaggct
tcaaagcgcctccatataaaggagcatactgtacttgatggatctggatctgttttcaaa
ttagctgctccagtggaatgcaaaggcattgttggtagtgatgataggcattatctattg
gacttgatgagagtcactcctcgtgatgcaaattatacaggacctggttccagattttgt
gttctaagacctgaattaattgctgcctattgccaagctaaagaaatagagcaatcaaag
tctaaggctaaacttgaggattccaccgccgtttccgagccttccaaagttgaagatggc
gaagctcaggtagaagaaaagcctgccgtttccgagccttccaaagttgaagatggcgaa
gctcaggtagaaggaaagctggatgctggggtcgcagatgccgagacccagaatatacct
gaaggtgaaaaggtggctgctgaggaatgtggctctgggcatgatgccggaacaaaatcg
tgcacggaaattcttttcaatcccaacgtttttactgaatttaagttagctgggagccaa
gaggaaatacaggcagatgaagaaagcgtgaggaaagttagtttgtaccttaaagatgtg
gtccttccgaaattcaataaagatctttgctcacttgaggtttcaccgatggatgggcag
acattaactgatgcactccatgctcatggaattaatgttcgctacattggaaaagttgcg
gatggggctaaacatttgcctcacttgtgggatctttgcttgaacgagattgtggtgagg
tctgccaagcacatattcaaggattttatgagaaattcagaagatcatgaactcgggcct
gcaatggcacgctttcttaactgtctgtttggaaattgtcaacctatatctggaaaaggt
gttgctagtggtactaaagcacgaacgccgaataaggcttcaggaaaatctactaggggg
catggaagactgaaacaaggggtatctgccgaaagaaaacccatgccttacactagtgta
acctctgatagcttgtggtccgacattctagagtttgcaaaagtcaaataccagtttgac
ttgcctgaggatgcaagatctcgtgtaaagaaaatttcagttatacggaacttttgccag
aaggttggtctagcagttacgtcgcgcaaatatgaccttgccgcagcacttcctttcagt
ccctcagatataataaatcttcaacctgtggttaagcattcaattcctgtgtgttcagtt
gctaaggatcttgtggaaactgggaagattcagttggctgaggggatgctaggtgaagct
tacagtctattttcagaagcattcacgatacttcagcaggttaccggtccaatgcatagg
gaggttgctaactgctgtcgataccttgccatggttctgtatcatgccggtgatatggct
ggtgcgataatgcagcagcatcgggaacttatcataaatgaaaggtgtcttggtctagac
catcctgatactgctcacagttatggcaatatggctctcttctaccatggtcttaatcaa
acagaacttgctctgaggcacatgtcccgtgcattactcctattaagtttgtcatcaggg
cctgatcaccctgatgtggctgccacatttataaatgttgcaatgatgtatcaagatact
ggaaagatgcagacagcccttcgttatttgcaagaagctttgaagaaaaatgagaggctt
ttgggcgaggaacatattcaaacggctgtgtgctatcatgctctggcaattgcgttcaac
tgtatgggtgcctttaagctctcccaccagcatgagaagaagacatatgatatacttgtc
aaacaactcggagaggaggactccagatcacgggattcccagaattggatgaatacattc
aaaatgcgagaagtacagatgactgcacagaagcagaaaggtcagacactaaatgcagcg
tctactcaaaaagctattgacattttgaaggcccatcctgatttgatacatgcatttcaa
gctgcgactgcatctaattatgctagcggttctgtcaacaaaaacttgaacgcatcagtg
gttggtgaggccttccctcgggggaggggagttgatgaaagagctgctcgtgcagctgca
gaagccaggaagaaagctgctgcaagaggccttctaatacgccctcacggtgtttcagtt
cctgtccaaaccttatcacagttgccagagatatacaacctaattaacccggggttgacc
ccaaacgttccaaaaccagaggaagcagacaaagctaaaaaggtgaatggtcatcctcca
agaggatctggaaatgcccaggacggagaagttaaagtagagaaacgagctgaaacacca
gccggcttaggcgcgggcatctctgcattgggtccagagaaaaagaagtccaaagccaag
gtagccgcctga
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integrated database retrieval system
