Daucus carota (carrot): 108202545
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Entry
108202545 CDS
T05350
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
dcr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108202545
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108202545
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108202545
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108202545
03036 Chromosome and associated proteins [BR:
dcr03036
]
108202545
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108202545
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108202545
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108202545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_13
DUF2252
IGFBP
Motif
Other DBs
NCBI-GeneID:
108202545
NCBI-ProteinID:
XP_017226485
UniProt:
A0AAF0Y1E2
LinkDB
All DBs
Position
9:39011464..39021599
Genome browser
AA seq
474 aa
AA seq
DB search
MHNGSRAADDASPATTLPASSMLWVRNLRRFIGSGAGLGSEALMELETKRILLDIFKEKQ
QKSAEASSIPSFYKKKPEDGSISHRVQRLAKYRFLKKQSDLLLNADDLDAMWVCLRENCV
IDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKFEKDESGRIAILPFYLYVM
RTVSLTQARIDMSELDEDSDGFLQPLEMEAYIRGLIPNLAQLRDMPAAFVQMYCRIAAHK
FFFFCDPHRRGKACIKKVLLSNCLQELMELHQETEEEVTDTEQAENWFSLTSAQRICDMF
LALDKDMNGTLGKQELREYADGTLTDIFIERAFDEHVRRGKTGGGNAREMDFESFLDFVL
ALENKDTPEGLTYLFRCLDLHGRGFLTTADIHTLFRDVHQKWIDGGNYELCIEDVRDEIW
DMVKPSDPLRITLADLLSCKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPEEE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcataatggctcacgcgccgccgacgatgcctcaccggcgaccactctaccggcatct
tcaatgctctgggtccgcaatcttcgccgcttcattggatccggcgctggtctcggttct
gaagccttaatggagctcgaaactaagagaattttgctagatatctttaaagagaagcaa
cagaagagtgctgaagctagctcgataccaagcttctataaaaagaaacctgaagatggt
tctattagtcacagggtccagaggctagcaaaatatcgatttttaaagaagcaatcagat
ctgttgctaaatgctgatgatttggatgctatgtgggtatgtttaagagagaattgtgtt
attgatgatgccactggtgctgaaaagatgaattatgaagacttttgccacattgcctct
gtatgtacagaacagataggccctaaatgccgacggttctttagtccttcaaattttatg
aaatttgagaaggatgagtcaggaaggattgccatactccccttctatctctacgtgatg
cgtacggtctcacttactcaggcgaggattgacatgagcgagcttgatgaggattctgat
ggatttcttcaaccacttgaaatggaggcctacataagaggccttattcctaatttggca
caattgagggacatgcctgctgcctttgttcagatgtattgtcgcatagctgcacataaa
tttttcttcttctgtgatccacatagacgaggtaaggcatgcataaagaaggttttactt
agcaactgtcttcaagaattgatggagctgcatcaggaaactgaggaagaagtcactgat
actgaacaagcagaaaactggttttcattgacatctgcacaacgcatatgtgatatgttc
cttgcccttgacaaagatatgaatgggacattgggcaagcaagaacttcgagaatacgca
gatggaactctgacagatattttcattgagagagcttttgatgagcatgttcgccgtgga
aaaactggaggaggtaatgctcgtgagatggactttgagagctttcttgattttgtgttg
gccctagaaaataaagataccccagagggcttgacatatctattccggtgtctcgatctt
catggaaggggcttccttactactgctgatattcatacgctcttcagggatgtacatcaa
aaatggattgacggagggaattatgagttgtgcattgaagatgtacgggatgagatatgg
gatatggtgaagccaagtgaccctttaagaatcacattagcagatttattatcttgtaaa
cagggtggtacagttgccagcatgctgatagatgtccgcggtttctgggctcacgataac
agagagaatcttctccaagaagaggaagagccggaggaagaataa
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