| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
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| KO |
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| Organism |
dcr Daucus carota (carrot)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:dcr00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108202562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dcr03019]
108202562
03012 Translation factors [BR:dcr03012]
108202562
Enzymes [BR:dcr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108202562
Messenger RNA biogenesis [BR:dcr03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108202562
Translation factors [BR:dcr03012]
Eukaryotic type
Initiation factors
Initiation associated factors
108202562
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:32918086..32935807
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| AA seq |
1184 aa
MQATPRQLLSSNSLPKTLEIFAQSLQMKDKSRPPPSAAVYVPPHQRLRSVITAAAPSPNL
SPVDSNSSTIKKSSDPYPYLFDLHEVQEKKQKQEEMNSQLGSKNVELSTQSGAFTSDNID
AWKWKLMTLIRDKDKQELVSREKKDRRDFEQIAALASQMGLHSCLYAKVVVVSKTPLPNY
RFDLDDKRPQREVMLPPGLERRIDVHLKEYLSLKTKCAEGFRHVFFRSNSDVSISSDEGV
FEQPEPLLSSKAATERIMWRRSMQLYTEQKSWQESAIEGQKMLEFRKGLPAYREKNAILN
SISQNQVVVISGETGCGKTTQIPQFILESEIESVRGALCSIICTQPRRISAISVSERVAA
ERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGI
NEDFLLIVLKDMLHHRPELRLILMSATLDAELFSSYFGGAPVIHIPGFTYPVQAHFLENI
LEMTGYRLTPQNQIDDYGLEKTWRINKQTTRKRKSQIASAVEDSLRVADFKEYSTGTRES
LSCWNPDYLNFNLIEHLLCNICENEKPGAVLVFMTGWEDISSLKDKLQLHPTLGDTTRVL
LLACHGSMATLDQKLIFKKPEGEVRKIVLATNIAETSITIDDVVFVIDCGKAKESSYDAL
NNTPCLLPCWISKASAQQRRGRAGRVQPGECYHLYPRCVFDAFADYQLPEILRTPLQSLC
LQIKSLDVGSITDFLSRALQSPESLAVQNAIEYLKIIGALDENKNLTVLGRYLAKLPLEP
KLGKMLILGSIFNCLDPVLTIVAGLSVRDPFLAPVDKKDQAEAAKAQFSRAYSDHLALVR
AYEGWKAAEIDLAEYRYCWNNFLSAQSMKTIDSLREEFYSLLRETGLADSNINMHNVWSY
DENLLKAVICYGLYPGICSIVHNEKSFSLKSMEDGQVNLYSNSVNARASKIPFPWLVFNE
KIKVNSVFLRDSTAISDSALLLFGGSISRGNIDGHLKMMGGYLEFFMEPMTAEMYQTLRS
ELEELIQNKLLNPRMDLHAHHALLSAMRLLLAEDQCGGRFVFNRAVTQNPSKPMVTVVEP
QSMVSRTESGPGGDNSKSQLQTLLTRAGHSAPIYKSNQLDNNQFQSTVEFNGMQIMGRPC
NTKKQAEKDAAAEALQLLLGKKQMGREYIDQMSMMLKKSKKDHN |
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| NT seq |
3555 nt +upstreamnt +downstreamnt
atgcaagccactcctcgccaattactctcctctaattcactccccaaaaccctagaaatt
ttcgctcaatcactacaaatgaaggacaagtcacgaccaccgcccagcgccgccgtatac
gtgccgccgcaccagaggctccgctccgttatcaccgctgcggcgccgtcgccgaatttg
tcgccggttgactccaattcgagcacgattaagaagtcaagtgatccatacccgtacttg
tttgatttgcatgaggttcaggagaagaagcagaagcaggaggagatgaattcgcagctc
ggttcgaaaaatgtcgaattatctactcaatcgggtgctttcacttcggataatattgat
gcttggaaatggaaattaatgactcttatacgagacaaggataagcaagagttagtttca
cgggagaagaaggaccgtcgtgattttgagcaaatagcagctttggcaagccaaatgggt
ctgcacagctgtttatatgctaaagtagttgttgtcagcaagaccccattgcctaattat
cgatttgatctcgacgataagcgtccacagcgagaggtgatgctgcctcctgggttagag
aggagaattgatgtgcacctgaaagagtatctatcactgaaaactaaatgtgcagaaggt
tttcggcatgtatttttcaggtcaaacagtgatgttagtatctccagtgatgagggtgtc
tttgagcaaccagagccactattatctagtaaagctgcaacagagagaattatgtggagg
aggagtatgcagctgtacaccgagcaaaaatcttggcaggaatctgcgatagaaggtcaa
aagatgttggaatttcggaaaggtctccctgcttatagagagaagaacgcaatactaaat
tccatatcacagaatcaggtggttgtcatctctggtgaaactggttgtgggaagactaca
caaattccccaatttattttggaatctgagattgagtctgtacgtggagccttgtgtagt
atcatatgcactcagcctagacgaatatccgctatatccgtctctgaaagagttgctgct
gagaggggggagcagttgggtgaatcagttggatataaagttcggttggagggtgttaaa
ggtagggatacccgtctcctattttgcacaactggcatcctgttaagaagattacttgta
gatagaaatttgaagggtgtaacacatgtgattgttgatgagattcatgaacgtggaata
aatgaagattttctgctcattgtccttaaagatatgctacatcatcggcctgaactaagg
ttaattttgatgagtgcaaccttagatgcggagcttttctcgtcttactttggtggggct
cctgttattcatattccgggtttcacgtatcctgtgcaagctcattttctggaaaatatt
ttggaaatgactggatacagattaactccacagaaccaaattgacgattatgggctagag
aaaacatggagaataaacaaacaaactacaagaaagagaaagagccaaattgcttctgct
gtcgaggattcactgagagttgccgactttaaggaatatagcacaggaacaagggagtcc
ttgtcatgctggaatcctgattatcttaatttcaatctcattgaacatcttttatgcaat
atttgtgagaatgaaaaacctggtgctgtcttagttttcatgactggatgggaagacatc
agttccctaaaggataagctccaacttcatccaacgctgggagatacaacccgtgttcta
ttgctggcgtgccacggttctatggctaccctggatcagaaattaatatttaagaagccg
gaaggtgaagtgaggaaaatagtactagctactaatattgctgagactagtattactata
gacgatgtggtttttgttattgactgtggaaaagccaaagagtcgtcatatgatgcatta
aataacacaccttgtttgcttccatgctggatttcgaaggcttctgctcaacagcgaaga
ggaagagctggccgtgtgcaacctggtgaatgttatcatctctaccccagatgcgttttt
gacgcttttgctgattaccagttgccagagattttgagaacgccgttgcagtccctctgt
ctgcaaataaaaagtttagatgttggaagtattactgattttctatctagggctttgcag
tcaccggagtcactagcggttcaaaatgccattgaatatttgaagatcatcggagcttta
gatgagaataaaaacttgacagtcttggggcgctatcttgcaaagcttccactggaacca
aaacttgggaagatgcttatattgggctcaatattcaattgcttggacccagttctaact
attgttgctggtcttagcgtcagagacccattcttggcaccggtggataagaaggatcaa
gcagaagcagcaaaagcacagttctctcgtgcttacagtgaccacctagctctggtccgt
gcttatgaagggtggaaagctgccgagatagatctagcagaatacagatattgttggaat
aactttctttctgcacaatcaatgaaaactattgattctctacgagaggaattttattct
ttgctaagagaaactgggcttgctgacagcaacataaacatgcacaatgtgtggagctat
gacgagaatctcctgaaggcagttatttgctatggtttgtatcctggaatatgctctatc
gtgcacaatgagaagtcattttcattgaaatctatggaggacggtcaagttaatttgtat
tctaactcagtaaatgcccgggcctctaagattccatttccgtggctggtttttaatgag
aaaatcaaagtgaactcagtttttcttcgagattcaactgccatatcagattctgcactt
cttttatttggaggaagcatttctagagggaatattgatggtcatttaaagatgatgggg
ggatatttagagttctttatggaaccgatgacagcagaaatgtatcaaaccttaaggagt
gagcttgaagagttaattcaaaacaaattgctgaaccccaggatggacttgcatgcacac
catgctcttctatcggcaatgcgtttgcttcttgctgaagatcagtgtggtggaagattt
gtttttaaccgtgcagtgacacaaaacccctctaaaccaatggttacagtggtggaacca
caatctatggtttctagaacagagagtggacctgggggtgataattcaaaaagtcagctg
caaacgttgcttactcgggctggacattctgcccccatatacaaatcaaatcaactggac
aacaaccagttccagtccactgtagaatttaatggaatgcagataatggggaggccttgc
aacactaaaaaacaagcagaaaaagatgcggctgctgaggctttgcaattgttattgggg
aaaaaacagatggggcgtgaatacattgaccagatgtcaatgatgctcaaaaagagcaag
aaggatcataattag |
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