Daucus carota (carrot): 108202588
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Entry
108202588 CDS
T05350
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108202588
Membrane trafficking [BR:
dcr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108202588
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
108202588
NCBI-ProteinID:
XP_017226550
LinkDB
All DBs
Position
1:complement(3652606..3673638)
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AA seq
1838 aa
AA seq
DB search
MENSSPNGHRFRRISRQSFAGSLNLDPLLDENLEQWPHLSELVQCYRTDWVKDDNKYGHY
ESIGPISFQNQIFEGPDTDIETEMHLANARQNKIDDTDDDIPSTSGRQFTDAASKSSSLN
VLKHLGESPLPTYEPVFDWETERSTIFGQRIPETQLAQYASGLKISVKVHSLSFQAGLVE
PFYGTICLYNKERREKLSEDFIFSALPTEMQEASSSYEPRGIFYLDTPSASVCLLIQLEK
PATEEGGVTPSVYSRKEPVHMTEREKQKLQVWSRIMPYRESFAWAIIPLFDSNINSSPGG
PASPSSSVAPNVSVSSSQDASDPVAKLDGKLGYSSGNSVVVEVSNLNKVKEGYTEDSLQD
PKRKIHKPVKGVLRLEIEKLQAGPVDFENASEGGSIDHEDQITDSRFAKCPSNGSDGPQN
GHSKVNYYEGKELPRNGSIALGNTDLNTDDFQAFDFRRTTRNEPFLQPFHCLYVYPITVS
LSRKRNLFIRVELRKDDGDARKQQPLEAMHSREPGASLQKCAHTQVAVGARIASYHDEIK
VSLPAIWTPSHHLLFTFLHVDLQTKLEAPKPVVIGYASLPLSTHAQLRSEISLPIMRELI
PHYLQDGGKERIDYLEDGKNVFKLRLRLCSSLYPISERIRDFFLEYDRHTLRTSPPWGSE
LLEAINSLKNVDSTALLQFLQPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDE
AERNIFLVNYVDYSFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLSMAWFF
LELIVKSMALEQTRLFYHNLPLGEDIPPMQLKESVFRCILQLYDCLLTEVHERCKRGLSL
AKRLNSSLAFFCYDLLSIIEPRQVFELVSLYIDKFSGVCQLVLHDCKLTFLQIICDHDLF
VEMPGRDPSDRNYLSSVLIQELFLTWDHDDLSLRAKAARILVVLLCKHEFDARYQKPEDK
LYIAQLYFPLVGQILDEMPVFYNLSSVEKREVLIVILQIIRNLDDASLVKAWQQSIARTR
LFFKLLEESLVLFEHRKPADSMLMGASSRSPVADGPVSPKYSDRLSPAINHYLSEASRQE
VRPQGTPENGYMWQRANSQLSSPSQPYSLREALAQAQSSRIGASTQALRESLHPILRQKL
ELWEENLSAAVSLQVLEITEKFSSTASSHSIATDYGKLDCITSIFTSFFSRYQPLAFWKA
MFPVFTSVFQLHGATLMARENDRFLKQIAFHLLRLAVFRNHNIRKRAVVGLQILVRSSFS
YFTQTARLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRLRNSLEEMADESKSGNLI
TECGLPENALGTIPDALAEKKWSWSEVKILANSIILALDASLEHALLASVMNTDRYAAAE
SFFKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVGVAGVVMQALVSRNDGVWG
NDHITALRKICPMVSNEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFC
ANILELVIPVYKSRRAYGQLAKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYGEKFG
KLDKKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKSEELQPGVCYLQ
ITAVDPVMEDEDLGSRRERIISLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRT
VLQTEGSFPALVNRLVVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSDGDQLPRL
QSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRV
HFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcgtctccaaacgggcatcgttttagaagaatttcccgtcagtccttcgct
ggtagtctgaacttagatccactgcttgatgaaaacttggaacagtggccacatcttagt
gaacttgttcagtgctacagaactgattgggtgaaggatgataacaagtatgggcattat
gagagcatcggcccaatatcatttcaaaatcaaattttcgagggacctgatactgatatt
gaaacagaaatgcatcttgctaatgcaaggcaaaataagatcgatgatactgatgacgac
atcccaagtacttctgggaggcagtttacagatgccgcctccaagtcatcaagcttaaat
gttttaaagcatttgggagaatccccactgcccacttatgaacctgtttttgactgggaa
actgagaggtcgacaatatttgggcaaaggatcccagaaactcagctagcgcaatatgcc
agtggattgaagatatcagttaaagtccattccttgtcatttcaagcgggactagtggag
ccattttacggcactatctgtttgtataacaaggaaaggagggagaaactctcagaggac
ttcattttttctgcattacccacagaaatgcaggaggctagcagttcctatgaacctcgt
ggtattttttatttagataccccatcagcatcagtttgtcttctgatccagttagagaag
cctgccacagaagaaggtggggtaactccctctgtttattcacgtaaagaaccggtccac
atgactgagagagaaaagcagaaactccaagtgtggtcccgcatcatgccctacagggaa
tctttcgcctgggctattattccattgtttgatagcaatattaattcttcccctggcggg
cctgcttctcctagtagttctgttgctcctaatgtgtccgtatcaagttcacaagacgcc
tctgatcctgttgcaaagttagatggaaaactaggttactcaagcggaaactctgttgta
gttgaagtatcaaatttaaataaagttaaagaagggtatactgaggactcactccaggat
cccaagcggaaaatccataaacctgtaaaaggagtgctgagattggaaattgaaaagctc
caagctggtccggttgactttgaaaatgcttcagaaggcggaagcattgatcatgaagat
caaattaccgattcaaggtttgcaaagtgtcccagcaatggttctgatggacctcagaat
gggcattcaaaagtgaattactatgaaggaaaagagttacctcgaaatggatcaattgct
ttgggaaatacagatttaaatactgatgatttccaagccttcgacttccgaagaacaaca
agaaacgagccgtttctgcagccatttcattgtctctatgtttatccaattactgtaagt
ttgagtaggaaaaggaacctgtttatacgtgttgaactcaggaaggatgatggtgatgct
cgtaaacaacagccattggaggcaatgcattcaagggaacctggtgcatccctccagaaa
tgtgcccacacacaagttgctgttggtgctaggattgcttcttaccatgatgaaatcaaa
gtttcacttccggcaatatggacaccatcgcatcaccttctgttcactttcttgcatgtt
gatcttcagacaaaactagaagctccaaagccagtggtaattggatatgcatcactcccg
ttatcaacacacgcacagttgagatcagaaatttcactgccaataatgagagagctgatt
ccgcactatcttcaagacggcggaaaggaaaggatagattacctcgaggatggcaagaat
gtatttaaattgcgattaaggctgtgttcatccttatatccaattagtgagcgcattaga
gatttttttctcgagtatgatagacacacactccgaacaagtccaccttggggatccgaa
ctacttgaggctattaacagcttgaaaaatgttgattcaactgctctgcttcagttcctt
cagccaatactaaatatgcttctccatctaattggaaatggtggagaaactcttcaggtt
gcagccttcagagccatggtcaatatactaacgcgggttcaacaagagtcagttgatgag
gctgaacggaacatttttctagtgaactatgtggactactcctttgatgattttgggggt
cgtcaaccacctgtttatcctggtttatcaactgtatggggaagcttggctcgcagtaag
gcaaaaggatatcgtgtaggaccagtttatgatgatgtcttgtcaatggcatggtttttc
ttagagttaattgtcaagtcgatggcattagagcagactcggctgttctatcacaacctt
ccacttggtgaagatattcctcccatgcagttgaaagaaagtgttttcagatgtatactg
cagctatatgattgccttctaacagaagtacatgagcgttgcaaaaggggtctaagcttg
gcaaaacgcttgaacagtagtctggcgttcttttgctatgatcttttgtcaatcattgag
cctcgtcaagtatttgaattggtctctctgtacattgataagttctctggggtgtgtcag
ttagtgcttcatgattgcaagcttacatttttacagattatttgtgatcatgatcttttt
gtggaaatgcctgggagagatccttcagataggaattacctttcttctgtcttgatacaa
gaacttttcttaacatgggaccatgatgatttatctctgcgggcaaaggcagctagaatc
ttggtagtccttttgtgcaagcacgagtttgatgctcgttaccaaaagcctgaagacaaa
ttatatattgcacaactgtactttccccttgttggccagattctggatgagatgcctgta
ttttataatcttagttctgttgaaaaacgtgaagtcttgattgtcatcttgcaaataata
cgtaatttggatgatgcatcattggtgaaggcttggcagcaaagtattgctcgaaccaga
ttattttttaaactgttggaggaaagcttggttctgtttgagcataggaaacctgctgat
agcatgcttatgggcgctagttctcgcagcccggttgctgatggacctgtctctcctaaa
tattctgacaggctttcacctgccattaaccactatctatcggaggcatcaaggcaagaa
gtcagaccgcaaggcactcctgagaatggatacatgtggcagagagcaaattcccagtta
agctctcctagtcagccatattctttaagagaagcacttgctcaggcacagtcatctaga
attggcgcttcaactcaagcattgagggaatctttgcacccaatcttgaggcaaaagctt
gaactttgggaagaaaacttgagcgctgctgtcagcctgcaggtcttggaaataacagag
aaattttccagtaccgcttcgtcacatagtatcgccacagattatggaaaacttgattgc
ataacatccatatttacaagcttcttctcacgttatcagccgctagcattttggaaagca
atgtttccggtgttcaccagtgtctttcagcttcacggagcaacactaatggcaagggaa
aatgatcgattcttaaagcaaattgcttttcatcttttacgtcttgctgtttttcgaaat
cacaatatcagaaaaagagctgtggtgggccttcagatactcgtccggagctctttctct
tactttactcaaacggcaaggttaagggtgatgctgaccataacattatcggagttgatg
tctgatgttcaagtgacccagatgaagtctgacggaacgcttgaagaaagtggggaagca
cgccgtctccggaattctttagaggaaatggcggacgagtctaaaagtggaaacttaatc
acagagtgtggtctaccggagaatgcacttggtactattccagacgcattagctgagaaa
aaatggtcgtggtcggaggtgaaaatccttgccaatagcattattctggctctcgatgct
agcttggagcatgcactcttggcttctgttatgaacacggacagatatgctgccgcagaa
agtttctttaaacttgcaatggcatttgctcctgtaccagatctccacataatgtggtta
ttgcatctttgtgatgcacatcaggagatgcagtcatgggctgaagctgcacagtgtgcg
gtgggcgttgcaggtgttgtaatgcaggctctcgtaagtagaaatgatggagtctggggc
aatgatcatattactgcactacgcaaaatttgccccatggttagcaatgagataacatcc
gaggcctctgcagctgaggtagaaggatatggtgcttcgaaactcacagttgattctgca
gtgaaatacctacagctagcaaataagcttttttctcaggctgagctctaccatttctgc
gcaaacattctcgaacttgtaattccagtttataaaagcaggagggcatatggacagcta
gccaaatgtcacacaatgctaaccaatatctatgaatcaattcttgagcaggaatcaagt
ccaattcctttcactgatgccacatattatagagttggattttatggtgaaaaatttggc
aagttggataaaaaggaatatgtttacagagagccccgcgatgttcgattgggcgacata
atggaaaaacttagtcatatatacgagtcaaggatggatggtaatcataccttgcacata
attccagattctagacaagtcaaatctgaagaactgcagcctggagtctgttacttgcag
ataactgctgtggatcctgttatggaagatgaagatttgggaagtagaagggagagaata
atctctctttctacaggaagcgtccgtgcacgtgtctttgatcgcttcttgtttgatacc
ccttttacaaaaaatggcaagacccaaggtggattagaagaccaatggaagcgacggact
gttcttcagactgagggatcgtttcctgcccttgtcaacaggcttgttgtaacaaaatca
gaatctcttgagttctctcccgtagagaatgcaattggaatgattgaaactcgcacggct
gcattaagaaatgagcttgaagagcctcgcagttctgatggtgatcagctcccacgtttg
cagagtctacagagaattcttcaaggctctgtcgcagttcaggtaaacagtggcgtcctt
agtgtatgcacagctttcctgtcaggtgagccagcgacaaggctgagatcacaggagctg
cagcaactcattgctgctctccttgaatttatggctgtttgcaaacgtgccattcgtgta
cacttcaggttaattggggaggaagaccaagatttccacacacagttagtcaatgggttt
cagtcactgactgcagagttgtctcattacatccctgccattctttccgagctctga
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integrated database retrieval system
