Daucus carota (carrot): 108202721
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Entry
108202721 CDS
T05350
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108202721
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108202721
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
108202721
NCBI-ProteinID:
XP_017226732
UniProt:
A0A175YF96
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All DBs
Position
9:7418320..7422941
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AA seq
378 aa
AA seq
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MATANPFDLLGDDDNDDVSHLIALQQQKKAAAEKSAEKAAPADKSAKPAAKLPSKPLPPA
QAVKEAKSEGGRGGGRGGNRGGGGGRGYGRRDGGGYDRRDGGGYDRDSSRNENSFGNGGT
GGGQGAIRETDSGRTFERRGGYGGPQSGFRGERRGGYSNGEEGEGDRPRRVFERRSGTGR
GNEYKREGSGRGNWGSQTDELSQVTEEVTIEGEKKVDTEKPSVEDDALDGNKEKPTNEPE
EKEPEEMTLEEYQKILEEKRKALEALKTEERKVEIDKDLAAMQPLSSKKSNDEIFAKLGS
DKDKRKEIAEKEERAKKSLSINEFLKPADGEKYYNPGGRGRGRGRGSRGGFGGGSGGSSY
AEAPAIGDPSQFPTLGAK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgctaatcctttcgatttgctgggcgacgatgacaacgacgacgtttcgcac
ttgattgctctgcagcagcagaagaaagcggcggctgagaagtcggctgagaaggcggcg
ccggctgacaagtcggctaagccggcggctaagctgccctccaagccgctccctcctgct
caggctgtgaaggaggctaagagtgaaggtggacgtggtggaggccgtggcggaaaccgt
ggtggtggcggcggccgtgggtatggccgccgtgatggaggtggatatgatcgccgtgat
ggaggtgggtatgatagagactctagcaggaatgagaattcatttggtaacggtggaact
ggtggtggtcaaggtgcgattagagaaactgactctgggaggacctttgaacgacgtggt
ggttatggcggcccacagagtggtttccgtggtgagcgccgtggtggttatagtaacggg
gaagagggggagggggaccgccctcgtagggtgtttgagcgtaggagcgggacaggacga
ggtaatgaatacaaacgggagggatctggccgaggcaactggggatcacagactgatgaa
ttgtctcaggtgacggaggaagttacaattgaaggtgagaaaaaggttgatactgagaaa
ccttcagtagaggatgatgctttggatggaaacaaggagaaaccaacaaatgaacctgaa
gagaaggagcctgaggagatgacacttgaggagtaccaaaagattctggaagagaaaagg
aaagctttggaggcattgaagactgaggaaaggaaggttgaaattgacaaagatctcgca
gctatgcaaccactctcaagcaagaagagcaatgatgaaatctttgcgaaactcgggtct
gacaaggataagcgaaaagaaattgccgagaaggaagaacgagcaaagaagtcactcagc
ataaatgagtttctgaagccagctgatggtgagaagtactacaatcctggtggtcgaggt
aggggtcgtggacggggttctagaggtggttttggtggcggcagtggagggagcagttat
gccgaagctcctgctattggagatcctagccagttccctaccttgggggccaagtga
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