Daucus carota (carrot): 108202838
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Entry
108202838 CDS
T05350
Name
(RefSeq) AP-1 complex subunit gamma-2 isoform X2
KO
K12391
AP-1 complex subunit gamma-1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108202838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108202838
Membrane trafficking [BR:
dcr04131
]
Endosome - Golgi transport
Others
AP-1 complex
108202838
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
Cnd1
Sol_i_2
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
108202838
NCBI-ProteinID:
XP_017226889
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All DBs
Position
9:complement(44752203..44767142)
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AA seq
880 aa
AA seq
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MNPFSSETRLRDMIRAIRACKTAAEERAVVRKECATIRASVSDSDNDYKHRNLAKLMFIH
MLGYPTHFGQMECLKLIAAPGFPDKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHANQY
IVGLALCALGNISSAEMARDLAPEVERLLLFRDPNIRKKAALCSIRIIKKVPDLAENFVN
SAAALLKEKHHGVLLTGVQLCTDLCKVSAEALEYIRKRCTEGLVKVLKDVVNSPYVPEYD
VSGIADPFLHIRLLRLLRVLGHGDADASDCMNDILAQVASKTESNKNAGNAILYECVETI
MSIEDNSGLRVLAINILGRFLSNRDNNIRYVALNMLMRAITVDSQAVQRHRATILECVKE
SDASIRKRALELVYLLVNENNVKLLTKDLIDYLEISDQEFKGDLTARICSIVEKFSPEKI
WYIDQMLQVLSEAGNYVKDEVWHALIVVISNASDLHGYTVRLLYRAVQKSVDQGVLVRVA
VWCIGEYGDMLVNSVGTLAIEEPITVTESDTIDVIETAIKHHTSDLTTQAMCLIALLKLS
CRFPSCSERIQDIIVQNKGSLVLELQQRSIEFNSIIQKHQNIRSALCERMPVLDESTYSV
RRAGSLPAAASSLQASAVTLSNGVTKPNAAPLVDLLDLSSDDAPVPNPSHGNDFLHDLLG
VDLSSGLSQAGTNQPQKSGTDALLDLLSIGTTPAPSNFSALDGLSLGQGADTTVSALAGL
ASTSTAIPATQPSPLVGSSPVLDLLNGFGPSEHIQEESVPAYPSIVAFESNNLKMTFNFS
KQPGNLQSTHIEATFINKSSNVYSEFMFQAAVPKFLQLHLDPASSNTLPASGEGSITQKL
RVTNSQHGKKSLVMRIRIAYKLNNEDVLEQGQISNFPHGL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttctcttcggagacgcgtctcagggacatgattcgggctatacgtgcttgc
aaaactgcagcagaagaacgggctgttgtaagaaaggagtgtgctactatacgtgcttca
gttagtgatagcgataatgattataagcatcggaatcttgcaaaactcatgtttattcac
atgcttggttatcctacacattttggtcaaatggaatgcctgaagttaattgcagctccc
ggtttccccgacaagcgaataggatatctagggcttatgttactgcttgacgaaagacaa
gaagttctaatgctggtcacaaattcactaaagcaagatcttaatcacgcaaaccagtat
atcgtgggacttgctctttgtgcattagggaacatttcttctgcagaaatggctcgggat
cttgcacctgaagttgaaaggttgctgctatttcgtgatccaaatatacggaagaaagca
gcattgtgctctataaggattataaagaaagttcctgaccttgcggaaaactttgtaaac
tctgctgctgccttgcttaaagagaagcaccatggagtattgttaactggagtccaactt
tgtactgatctgtgtaaagttagtgcggaggcccttgaatatattagaaagagatgtact
gaaggcctggtcaaggtcctaaaggatgttgtgaacagtccatatgtgcccgagtatgat
gtgtctgggattgcagatccttttcttcatataagattacttaggcttttacgtgtctta
ggacatggagatgctgatgccagtgattgcatgaacgacattcttgctcaggttgcgtca
aagaccgagtcaaacaaaaacgcaggaaatgcaattctttatgagtgcgttgaaactatt
atgagcattgaagataatagtggcttacgtgtgcttgctattaatattttgggaagattt
ttatcaaatcgggacaataatatcagatatgttgcactgaacatgctgatgagagctatt
acagttgattctcaggcagtgcaaaggcatcgagcaaccattttggaatgtgtgaaggaa
tcagatgcttcaattcgtaaaagggccctcgaacttgtctatcttttggtgaatgagaac
aatgtaaagcttttgacaaaggatcttattgattatctggaaataagtgaccaagagttc
aagggagatcttactgctagaatttgctctattgtagaaaagttttcaccagaaaaaatt
tggtacattgatcaaatgctccaagttctgtctgaggctggaaattatgtgaaagatgaa
gtctggcatgcacttatcgttgtaatcagcaatgcttctgatcttcatggatacaccgta
agattactatacagagcagtccaaaagtcagttgaccagggagttcttgtgcgagtggct
gtgtggtgtataggagaatatggtgatatgttggtgaacagtgttggaacactagccata
gaggaaccaataactgtaaccgagtctgacaccatagatgtgatagagaccgccattaag
caccatacctcagatctaactactcaagcaatgtgtttaattgctttgttgaagctatcc
tgtcgtttcccatcttgctcagagaggatacaagacatcatcgtccaaaacaaaggaagc
cttgtgcttgaacttcagcaacgatctattgagttcaactctattattcaaaagcatcaa
aatataaggtctgctctgtgtgaaaggatgccagtacttgatgagtcaacttacagtgta
aggagggctggttcattaccagctgctgcttcatctttacaagcttcagcagtaactctt
tcaaatggtgttaccaaacccaatgccgctcctcttgttgatttactagatcttagttcg
gatgatgctccagtaccaaatccttcacatggcaatgattttcttcatgatcttcttggt
gttgatttatcttctggtctatcacaggcaggtacaaaccagcctcagaaaagtggcact
gatgccttattggatctattgtcaattggaacaactccagctccaagtaacttttctgca
ctagatggtttatctttgggtcaaggtgccgatacaacagtaagtgcattagcgggatta
gcatcaacttcaacagcaatacctgctacacaaccctcacctttagttggaagttctcct
gtgctggatttgttaaatggatttgggccttctgagcatatccaggaagagagtgtgcct
gcttatccatcaatagttgcatttgagagcaacaacttgaagatgacgttcaacttttca
aagcaacctggaaatttacagtcgacacatatagaggctacgtttattaacaagtcatcc
aatgtctattcagaatttatgtttcaagcagcagttccaaagttccttcagttgcatttg
gaccctgctagcagcaatacccttccagcaagtggagaagggtcaatcacacaaaaacta
cgtgttaccaatagccaacacggcaagaaatcccttgtgatgcgcattcggatcgcttac
aaattgaacaatgaagatgttttggagcaaggacaaataagcaattttcctcatggttta
taa
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