Daucus carota (carrot): 108202848
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Entry
108202848 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108202848
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108202848
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108202848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
zf-RING_Vps41
RIFIN
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108202848
NCBI-ProteinID:
XP_017226907
UniProt:
A0AAF0XY43
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All DBs
Position
9:complement(44137495..44139092)
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AA seq
331 aa
AA seq
DB search
MARILSADILNQTPPPPDFIYNTGSISQFPASSPPSSSSSSSSSSIVIVIIIITSAIIIS
ASIYLILRYLSRRFHRAFSDVIIPSNTNFCTENEVIIINDSLPLFTFGSLIGNIVTADCA
VCLSKFEAQDQLRLLPLCCHAFHVACIDTWLTSNQTCPLCRSSINPTESEVLDKMISIST
VTNDNSGNSFRIEIGSVSRRTDSTSNDNNRRSYSIGSFDYIVDDAGYELSRGSTHRREPS
EAASNVDKDSVGGQLMAPGESLAAEVAGGRNSWLRDYVDRIASISSRSIRSSGRFFSGSS
RRSEPVVAVGDLESSRVGEEISELFRWLSGV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaattcttagtgcagatattctaaatcaaacacctccccctcctgatttcatc
tacaacactggcagcattagccagttcccggcctcctcaccgccctcgtcttcttcctcc
tcttcgtcctcctcaattgttatcgttattattattataacttccgctataataatttcc
gcttcaatttacctaattcttaggtatttatcacgaagatttcaccgcgcattttcagac
gtgattattccatctaacaccaatttttgcaccgaaaatgaggtcattataatcaatgat
tcgttgcctttattcacatttggatcattaatcggaaatattgttacagctgactgtgcg
gtttgtttatcgaagttcgaggctcaggatcagctgaggctgctgccgttatgttgtcac
gcctttcatgttgcttgcattgacacgtggctcacgtcgaatcagacgtgtccgctctgc
aggtccagtattaatccgacagagtcggaggttctggacaagatgattagtatttccaca
gttacgaacgataattctggcaatagttttcgtattgagatcgggagtgtcagcaggaga
actgactctacctcgaatgataataacaggaggtcttattcgattggctcgttcgactac
attgtggatgatgccgggtacgagctctcgagaggctcgacgcacaggagggagccctcg
gaggctgcatcgaatgtcgataaggactcggtggggggtcaattgatggctccaggggaa
agcctggcggctgaagttgctggagggaggaatagttggctcagggactatgttgatcga
attgcatcgatttcttctcgttcgatacggagctcggggaggtttttttcggggagtagt
cggcgcagtgagcctgtggtggcggttggggacttggaatctagtagagttggggaggag
atcagtgaattgtttcggtggctgtcaggggtatga
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