Daucus carota (carrot): 108202897
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Entry
108202897 CDS
T05350
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108202897
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Gene cluster
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Motif
Pfam:
Sel1
Motif
Other DBs
NCBI-GeneID:
108202897
NCBI-ProteinID:
XP_017226989
UniProt:
A0AAF0XUT6
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Position
9:6653351..6659944
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AA seq
682 aa
AA seq
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MLRRVKTHRKILTILTLVLCIYPVSIYSRPFVLVLSQDDLKDPSPSDPLSPEPADSNSEW
DEFGDSDSKSDDELDPGTWRPIFEPESDPTRDPNWEDGYYSGVRRMMGAVSRGDVRMMEE
GVGEIEEAARGGHAHGQSMMGYLYNMGVLRERSKAKGFMYHYFAAEAGNMQSKMALAYTY
TRQDMHDKAVKLYAELAEVAVNSFLISKDSPVIEPVRIHNGAEENKEALRKSRGEEDEDF
QILEYQAQKGNAGAMYKIGIFYYFGLRGLRRDHSKALYWFLKAVEKEEPRSMELLGEIYA
RGAGVERNYTKALEWLTLASKQQLYSAYNGMGYLYVKGYGVEKKNFTKAKEYFEKAADND
EAGGHYNLGVLYLKGIGVKRDVKVACKYFIIAANAGQPKAFYQLAKMFHTGVGLKKNLPM
ATALYKLVAERGPWSSLSRWSLEAYLKGDVGKAFLLYSRMAELGYEVAQSNAAWILDKYG
ERSMCMGESGFCTDAERHQIAHSLWWQASEQGNEHAALLIGDAYYYGRGTERDYDRAAEA
YMHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDQAVEIDPSAKLPVTLALGSLWV
RKNCADSFLVDFIDSLPYVFPKVQLWVENVVLEEGNATILTLFVCLLTVLYLRERQRRQA
VVVAGEAANLHQPNDPVAPIGL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgctccggcgagttaaaacccatcgaaaaatcctcaccattctcacacttgtcctctgt
atctatcctgtatctatatactccagacccttcgtcctcgtcctctctcaagacgatctc
aaagacccatctccctccgatccactctcgcctgaaccggccgattccaactcggaatgg
gacgagttcggggactccgattccaaatccgacgacgagctcgacccgggcacatggcgc
cccatcttcgagcccgaatccgacccgacccgtgacccgaattgggaggatggttactac
tcgggggtccggaggatgatgggggcggtgagcaggggtgacgtcaggatgatggaagaa
ggggtgggggagatagaggaggcggcgcgtggggggcacgcgcatgggcagtcaatgatg
gggtatttgtataacatgggggtgttgagagagaggagtaaagcaaaggggtttatgtat
cattattttgctgctgaggctgggaatatgcagtcgaaaatggcgcttgcttatacttat
actcgacaagatatgcatgacaaagcggtgaaattgtatgctgaattagcagaggtagct
gtaaatagttttttgatatcaaaggactcgccagtgattgagccagtcaggatccacaat
ggggcagaggagaataaggaggctcttaggaagtctagaggggaagaagacgaggacttt
cagattttggaatatcaggcacagaaagggaatgcaggagccatgtacaagattggaata
ttttactactttggacttagaggtcttagacgcgatcactccaaggcattgtattggttt
ttgaaggcagtggaaaaggaggagccgaggtcaatggaacttcttggggagatctatgca
agaggggctggagttgagcgaaactacacaaaggcacttgagtggctaacgcttgcatca
aaacaacaactttattcagcttataatggaatgggatacttgtatgttaaaggttatgga
gtggagaagaagaactttaccaaagcaaaagaatactttgagaaagctgctgacaatgat
gaagccggtgggcattacaatttaggggtactatatctgaaagggattggagttaagaga
gatgtgaaggtagcttgcaaatacttcataattgctgctaatgcaggtcaaccaaaagca
ttctaccagttggctaagatgtttcacactggggtggggcttaagaaaaatcttcctatg
gcaactgcattgtacaaattagtagcagaacgaggaccttggagttcattatctagatgg
tccctcgaagcatacctgaaaggtgatgttggaaaagccttccttttgtactcaaggatg
gcagagttgggatatgaggtggcacaaagtaatgctgcctggatacttgacaagtatggg
gaaagaagcatgtgcatgggagaatctggattttgtacagatgcagagaggcatcagatt
gcccactccttgtggtggcaagcttctgagcagggtaatgaacatgctgcactgctgatt
ggggatgcatattactatggtcggggaacagagcgagattatgatcgtgcagcagaggct
tatatgcatgccaagtcccagtcgaatgcccaggctatgtttaatctgggctacatgcat
gaacatggtcaaggacttccttttgatcttcatcttgccaagcggtactatgatcaagca
gtagaaatcgatccatcagccaagcttcctgtaacccttgctcttggtagcttgtgggtt
agaaaaaattgtgctgacagtttcctggttgatttcatagattcactgccttacgttttt
ccgaaagtgcaattgtgggttgaaaatgtggtcctggaagaaggaaatgccacaatcctc
acactctttgtttgtcttttgactgtactctaccttcgggaacgacaaaggaggcaagca
gttgtcgtggctggggaggctgccaatctacatcaacccaatgaccccgttgcacctata
ggtttgtga
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