Daucus carota (carrot): 108203149
Help
Entry
108203149 CDS
T05350
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00740
Riboflavin metabolism
dcr00790
Folate biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
dcr01240
Biosynthesis of cofactors
Module
dcr_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
108203149
00790 Folate biosynthesis
108203149
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
108203149
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
108203149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
108203149
NCBI-ProteinID:
XP_017227398
UniProt:
A0A175YE56
LinkDB
All DBs
Position
9:complement(3328204..3333688)
Genome browser
AA seq
552 aa
AA seq
DB search
MAAMNMSGPSSAFPRLQTQKVFSLSNAQLVNLTEANIFTSDSSSAVGSRSGFCIKAINKV
NSTLPSGSRGLYSHPKSWRSTLHCSSSAGIEVQPDSIALGTLSADTSPSGSIFPVDSNEY
DLDHPTVGLSSIPQAIEDIRQGKMVVVVDDEDRENEGDLIMAASKVTPEAMAFIVKHGTG
IVCVSMKEEDLERLQLPQMVTHKDNEEKLTTAFTVSVDAKKGTTTGVSARDRATTILTLA
SKDSKPEDFNRPGHIFPLRYREGGVLKRAGHTEASVDLTVLAGLEPVSVLCEIVDEDGSM
ARLPKLQEFAKKENIKIVSIADLIRYRRKRDHLVERASSARIPTMWGPFTSYCYRSIIDG
IEHIAMVKGEIGEGVDILVRVHSECLTGDIFGSARCDCGNQLGLAMQQIEAAGRGVLVYL
RGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLM
TNNPAKYIGLKGYGLAVSGRVPLVTLITKENKRYLETKRAKMGHVYSQGFNSNVINVVTE
DGKPSTGEQSKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctgccatgaatatgtctggtccatcatcagcttttcccagattacagacacagaag
gtcttttctttgtccaatgcacaactcgtaaatctgactgaggcaaacatatttacatca
gactcttctagtgcagtgggtagtagatctggtttttgtattaaggctattaacaaagtc
aattccactctaccatctggaagcagaggcctgtattctcatcctaaaagctggagaagt
actcttcactgttcatcttcagctgggatcgaggtacagcctgattcgatagctctagga
acactttcagcagacacctctccttcaggcagtattttccctgttgacagtaatgaatat
gacttggatcatcccacagttggattgtcatccattccgcaggccattgaagacattcgt
caaggaaagatggtggtggttgtagatgacgaggacagagaaaatgaaggagatctaatt
atggcggcatcaaaggttacgcccgaggctatggcttttattgttaaacatggaactgga
attgtttgtgtgagcatgaaagaagaggacttggagaggttgcagcttcctcagatggtt
actcataaagataatgaggagaaacttactactgcatttacagtgtcagtggatgctaaa
aaaggtacaactacaggagtctcagctcgtgatagggcaacaacaatactgacccttgca
tccaaagattcaaaaccagaggatttcaatcgtccaggccatatatttccattgagatac
agggagggaggtgttttaaagagagctggtcatacagaagcttctgttgatcttactgtg
ctggctggacttgaaccagtttcagttttatgcgagattgtagatgaagatggttccatg
gctcgattaccaaagcttcaggaattcgcaaaaaaggagaacataaaaattgtgtctatc
gctgatcttatcagatatagaaggaagagggatcacctggtggaacgtgcttcttctgcc
agaatacctacaatgtggggaccatttacttcctactgttaccggtcaattatagatgga
attgaacatatcgcaatggttaagggtgaaataggggagggagtagatattctcgtcagg
gtacactcagaatgcctcacaggagatatatttgggtccgcaagatgtgattgtgggaac
cagcttggactggcgatgcaacaaattgaagctgcaggaaggggtgtattagtatacctc
cgtgggcatgaaggaaggggaatcggattgggccacaagctccgtgcttataatctgcaa
gatgatggacgtgacactgttgaagcaaacgaagaattgggcctacctgttgattcaaga
gagtatggtattggtgctcagatactaagagatctaggggttcgaacaatgaaactaatg
acgaacaaccctgcaaaatatatagggctcaagggttatggtttagcagtttcaggaaga
gttcccctagtgacccttattacaaaggaaaacaagagatatctagaaacaaaacgtgca
aaaatgggtcatgtttacagccaaggattcaatagcaatgtcatcaatgttgtcactgaa
gatggcaaaccaagcactggagagcaatccaagttgtaa
DBGET
integrated database retrieval system
