Daucus carota (carrot): 108203173
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Entry
108203173 CDS
T05350
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dcr01001
]
108203173
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108203173
Enzymes [BR:
dcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108203173
Protein kinases [BR:
dcr01001
]
Serine/threonine kinases: Other
Other
108203173
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108203173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
LisH
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
108203173
NCBI-ProteinID:
XP_017227434
LinkDB
All DBs
Position
9:43738955..43750750
Genome browser
AA seq
1935 aa
AA seq
DB search
MEAAAAAADVVAAAPPPEKPEEMNEEDDKVSANELLLIKAQRLMDKITSSPNNPSPSVLH
ALASILEAQESRYMEHTFDSTVNNVRAPHTIGRLGNLIRDNDDFFELISSKFLSEPRYSI
SVQAAALRILFSCSLTWMHPHVFEENVLENIHGWIVSDASKSSAEDHNSNNVHGLQKSSE
AEMLRTYSTGVLATCLAGGAQIVEDVLKSGLSAKLIRYLRIRTLGEPNRKDVNHSVERKL
ASSTSVRGKEEARNRFRYVSENFQLNAPRMIDGVTGNQIEEKDSDRNFTRPSYKHRNDGG
ESPDKLADDDDFAADAEGCEGWHIQDLRERYGKSGDRHGHGRPLREEDFDNGGQDSSERR
VSHGSVKLRGRGKINGYVDAKHGLASPGTVIGHECRTMDVTTTTDQNLRSIIDVEDNDGH
ATDREDYDDCFQECKIGSKDISELVKKAVRAAEAEARAAAAPAEAIRAAGDSAAEVVKTA
ALEAFKETNDEGAAVLAAANAATTVIDAGNAIEISRALSAVDSNPISQVTEQKKYDETEE
FYIPDSSSLENLRERFCIQCLVILGEYVEVLGPILHEKGVDVCIALLQRSSRPEEPKVVL
LLSDVLKLISTLAAHRKFAAVFVDRGGMQKLLNVPRVAQTFLGLSSCLFTIGSLQVIMER
VCALPSDVLYRVMELALQLLECPQDLARKDAALFFAAAFVFKAVLDCFDAQDGLHRLLNL
LHNAASVRSGVRGTFASGGSHNSDQSPPLEVLTSSEKQVAYHTCVALRQYFRAHLLLLVD
SIRPNKSNRSVARNVPSVRSAYKPLDISNEAMDATFHQMQKDRKLGPAFVRAHWPAVDKF
LALNGHVTMLELCQAPPVERYLHDLIQYALGVLHIVTLVPYSRKLIVNAALSNDRVGIAV
ILDAANGAGHVEPQIIQPALSVLVNLVCPPPSISNKPTLPSNGQQSIIQSLNGPIDGRDR
RAERNIPDPTIPNQNETREQTSDSVLEKRISSASLSTTSASNLSLTPVSAVPSGLVGDRR
ISLGVGAGCAGLAAQLEQVFHQAREAVRANNGIKVLLQLLQPRVLTPPGALNCLRALACR
VLLGLARDDAIAHILTKLQVGKKLSELIRDSGGQSSASEQGRWQAELAHVAVELIAVVTN
SGRASSLAATDAATPTLRRIERAAIAAATPISYHPRELLSLIHEHLQASGLATTATTLLK
EAQLMPLPSLAAPSSLSHQGSGQEIPSVHVHWPSRNTSCTFYSDKLKSASLDEDFSIKLD
SSVSSSKKRSLVFASTLGLQLKYYDSCPASKGNSTMKNLCVPEGTSETPSLISAIKPSGD
ADNSFKTPNTLLMKRKLSKTVETASFTSRKRVKISDNGIQNADYMTPGSVRRSSLLAESN
AFTTPRVLKDSHGRLISGGLLSENLEDISNSAQATPSVHRGLLNDPQSVSTERLTLNSIV
TQYLKNQHRHCPAPITTLPPLSLLHPHVCPESRQSIDAPSNVTSRLTTREYRSKYGGIHG
SRRDHQFVYSRFRPWRTCRDDSGAMLSCMTFLGDSSQIATGCDSGELKIFDSDNSNILEC
FTSQHALTALQSHLFEGTQLILSSSSHDVQLWDASSVSIGPRHSFDECKGGKLSNSGNSF
AALSLESTRREILLYDIQTCKLDSKLTNRNSSSSGRSHVYSLIHFSPSDTMLLWNGVLWD
LREPHPVHHFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTVLSFNGSG
DVIYATLRRNLDDLTAALQPRRVKHPLYSAFRTVDAVNYSDIATIPVDRCVIDFATEPTD
SIVGLVTMDDPAEMYSSARVFEIGRRRPTDDDSDPDDAETDEEDEDDDEDLDVNQLLEIV
GNGGSDMDDMSDDDDAPSELEDDEDEDQDEDDGVFMIDDQDEDGGMLEFVMEGDDSQVDE
SSSSDTDDDDSEGSF
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagccgccgccgccgccgacgttgtagctgcggcgccgccgccggagaaaccg
gaggaaatgaatgaggaagacgacaaagtatcagcaaatgaattgttgttgattaaagcc
cagagactcatggacaagattacttcatcgccgaacaatccgagtccaagtgttcttcac
gctctcgcttcaattctcgaagctcaagaatctaggtatatggaacatacatttgattcc
actgtgaataatgttcgtgctccacataccataggacggttggggaatctgatccgggac
aatgatgatttttttgaattaatatcttcaaagtttttgtcagaacctagatactcaata
tctgtccaggcagctgctttgaggattctcttcagctgttcattaacatggatgcatccc
catgtttttgaagaaaatgttttagagaatattcatggttggatagtaagtgatgcttcg
aagtcttccgctgaggatcataactcaaacaatgttcatggactgcaaaaatcatcagag
gctgaaatgttaaggacctattctactggagttcttgctacatgtttggccggtggtgct
caaatagttgaagacgtgttaaaatctggattgtcagcaaagttgattcgatatcttcgc
atccggactctaggggagccaaatagaaaagatgtgaatcattcagtagagcgcaaactt
gcttcatctacttcagttagagggaaagaagaagctaggaatcggtttcggtatgtttca
gagaatttccagttaaatgctcctaggatgatagatggggtgacaggtaatcaaattgaa
gaaaaggacagtgatagaaacttcactaggccatcatataaacatcggaatgacggtgga
gaatcccctgataaattggcggatgatgatgatttcgctgctgatgcagagggctgcgag
ggatggcatattcaggatttacgtgaaaggtatgggaaatctggtgatagacatggtcat
ggaagacctttaagagaagaagattttgataatggtggacaggattcatcagagcgcagg
gtaagtcatggatcagtaaaactcagaggaaggggaaaaataaatggatatgtggatgcc
aaacacggtttagcatctccagggacagtgataggacatgagtgtagaacaatggacgtg
acaacaacaactgaccaaaatttaagaagcataatagatgttgaggataatgatggtcat
gcgacagatagagaagattatgatgattgcttccaggaatgcaaaatcgggtccaaggat
atatctgaactcgttaagaaagcagtcagagctgccgaagctgaagcaagggcagctgct
gctcctgcagaagccatcagagctgctggtgattctgctgctgaagttgtcaagaccgct
gcattggaggcatttaaggagacaaatgatgaaggagctgctgttttggctgcggctaat
gctgcaacgaccgtcattgatgctggtaatgcaattgaaatttcaagggctttaagtgct
gttgattcaaatccaatctctcaagtgactgaacaaaaaaaatatgatgaaactgaggag
ttctatattccagacagtagttccctggaaaatttaagagaaaggttttgcatccagtgt
ctggtgatacttggagaatatgttgaggttcttggtcctattttgcatgaaaaaggggtc
gatgtctgtattgcactgttgcaaagaagttcgaggccggaggaaccaaaagttgtgctg
ctcttgtctgatgtgcttaaattaatctctacattggctgctcatagaaaatttgctgcc
gtgttcgtggatcgtggtggcatgcaaaagcttctcaatgttccaagggttgctcaaaca
tttttgggcttgtcttcatgcttgttcacgataggttcccttcaggttataatggaacgt
gtatgtgccctcccctcagatgttctctatcgggtgatggagttagctcttcaacttctt
gaatgtccccaagatctagcaagaaaggatgcagctttattttttgctgctgcatttgtt
ttcaaagcagtcctggattgctttgatgctcaggatggtttgcacaggctgttaaatctg
ttacataatgcagcatcagtgagatctggggtaagaggaacatttgcttcaggaggatca
cataatagcgatcagtctcctcctttggaagtgttgacctcatctgagaagcaggtagct
taccacacttgcgtcgcattaagacaatatttcagagcacacctcctgttgcttgtggat
tcaatacgtcctaataaatctaatcgaagtgtggcacgaaatgtaccaagtgttagatca
gcctacaagccccttgatatcagtaatgaggctatggatgcaacatttcatcagatgcag
aaggatcggaagcttggtcctgcatttgttagagctcattggcctgcagttgacaagttc
ttggccttgaatgggcatgtcacaatgctggagttgtgtcaggccccacctgtagaacgc
tacttgcatgacttgattcaatatgcattgggtgttctgcacattgttacactagtacca
tacagccgcaaactcatagtgaatgccgcacttagcaatgatcgtgtagggatagcagtc
atcttggatgcagcaaatggtgctggtcatgttgaaccacagattattcaaccagcactc
agtgtgctggtcaatcttgtttgtcctccaccatcaatcagtaataaaccaactcttcca
agtaatggacagcagtctatcattcagtcattaaatggtcctattgatggtagagacaga
agggcagagcggaatatcccagacccaaccattcctaaccagaacgaaacaagggagcag
acgagcgattcggttcttgaaaaaaggatcagctcagcgtctcttagtacaacttcagcc
agtaatctatcactaactcctgtatcagccgtcccgtctggcttagttggagatcgtaga
atttctttaggtgttggggctggttgtgcaggacttgctgcacaactggaacaagtattc
catcaagcaagagaagctgtccgggccaacaatggaatcaaggttcttcttcagcttctc
cagccacgcgtacttactcctccaggtgccctcaactgtcttcgtgctcttgcatgccga
gtgcttcttggtttagctagggatgatgcaattgcgcacattttaactaagcttcaggtt
gggaaaaagctgtctgaacttattcgagattcaggtggccagtcatccgcaagtgagcaa
ggcaggtggcaagcggaactagctcatgttgcagttgagcttattgcggttgtcactaat
tctggtcgtgcaagttcattagcagcgactgatgctgctactcctactttaaggcgtata
gagagagctgcaatagctgctgctactccaattagttatcatcccagagaactattgtca
ctgatacatgaacacctacaagcatctggattggcaacaactgctactacacttttgaaa
gaggctcaattgatgcccctgccatcattagcagctccatcatctctatcacatcaaggc
tctggacaggaaattccttctgtacatgtccattggccttctcgaaatacatcctgcaca
ttttattctgataaactaaaatctgcctcgttagatgaagatttcagcattaagcttgat
tcatctgtgtcgtcttcaaagaaaagatctttagtttttgcatctacacttggtttgcag
ctcaaatattatgattcttgccctgcatctaaaggtaacagtactatgaagaatttatgt
gtcccagaaggcacgtcagaaactccgtcattaatatctgcgataaaacccagtggagat
gcggataatagttttaaaactccaaatacgttgctaatgaagcgcaagttgtctaaaaca
gttgagactgcatcgtttacatcgagaaaacgtgttaagatcagtgataatggaattcag
aatgcagattatatgacccctggtagtgttcgtagaagcagtctgctggctgaatcaaat
gcttttaccacaccacgtgttttaaaagactctcatgggagattgatatcaggtggtttg
ctctctgaaaatttagaggatatcagcaattcggctcaagcaacaccttctgtacatcgt
ggtctgttaaatgacccacaatctgttagcacagaacgactgactttaaattctattgtc
actcagtatctaaagaaccagcaccgccattgcccagctcccatcactacattaccacca
ctctctcttttgcacccacatgtctgtcctgagtctaggcaaagcattgatgcaccatcg
aatgtgacttcccgacttactacacgtgaatacagaagcaagtatggggggatccatgga
agccgcagggatcaccaatttgtctatagtagattcagaccatggagaacgtgccgggat
gatagtggtgctatgctaagttgcatgacttttctaggagattcctctcagattgccact
ggttgtgattctggggagcttaaaatttttgactctgacaacagcaatatattggaatgc
tttactagccaacatgctttgacggctctccagtcgcatcttttcgaggggacacagtta
attctttcttcaagctcccatgatgtgcagttatgggatgcatcttctgtgtcaattgga
cctaggcattcatttgatgagtgtaaaggtgggaagttaagcaattcaggaaattctttt
gcagcattgtcattggagtcaacacgacgagaaattctgttgtatgatatacagacctgc
aaattggattcaaagcttaccaacagaaattcgagttcatcggggcgttcgcatgtgtat
tctctcattcactttagtccatcagacacaatgttactttggaatggtgtcttgtgggac
cttagggagccccaccctgtccatcactttgatcagtttactgattatggtggtggtggg
ttccatccagctggtaatgaggtcatcataaactctgaagtttgggatcttcggaaattc
aggcttcttcgcagtgtaccgtccctggaccaaacagtactttcttttaatggcagtgga
gatgtaatatatgcaaccttgagaagaaatcttgatgaccttacggctgccctacaacct
cgacgagttaaacatccactatattcagccttccgtactgtggacgctgtcaactactct
gatattgccactatacctgtggatcgttgtgtaattgactttgcaactgagcccactgat
tctattgttgggttggtcacgatggatgaccctgcagaaatgtattcttcagccagggtg
tttgagataggtcgcaggaggccaactgacgatgactcggatcctgatgatgccgagact
gatgaagaagacgaagacgatgatgaagacctagacgtgaatcaattgctggaaattgtt
ggaaatggtggaagtgatatggatgatatgagtgatgatgatgatgctccaagcgagctt
gaggacgatgaagatgaggatcaagatgaagatgatggggtattcatgattgatgaccaa
gacgaagacggtggaatgctggaatttgtgatggagggtgatgatagtcaggttgatgaa
tcatctagcagcgacacagacgatgacgactctgaaggttccttctag
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integrated database retrieval system
