Daucus carota (carrot): 108203361
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Entry
108203361 CDS
T05350
Name
(RefSeq) two-component response regulator ARR12
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108203361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108203361
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108203361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DTHCT
Motif
Other DBs
NCBI-GeneID:
108203361
NCBI-ProteinID:
XP_017227759
LinkDB
All DBs
Position
1:40305049..40308468
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AA seq
614 aa
AA seq
DB search
MTVDDKIDGEKEQFPVGMRVLAVDDDPTCLRLLDTLLRRCQYNVTTTSQAVVALQMLREN
KNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTELVMKGISHGACDYLLKP
IRIEELKNIWQHVIRRKKLEPKDSKNSDKPCVDSGDSREGFQGIGEPEPNGKNNRKRKDQ
NEDDDEERDENGQNDDDPSMQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKRILDLMNVE
NLSRENVASHLQKYRLYLKRISCVTSQQANMAAALGNADSAFLRMASLNALGNLPTMDSS
GQFQSVAFNSFSPSSVLGRLNSPAGLGIRSLSSSGAVQFGLAQNSSSSINGTANFHSAPQ
TGNQNGILYGMPMSTEIHQLPHSNNVNYGVLPVTESMIYTNSISSLDGKVNVTGLSNSQY
SASDGFSDVKIHVGSSSNACFGMPNNSLVVDGHHLHSQGLGGSVNQSLATANSLNSGFSF
QMPDIERRGTWPSAVQSLGDQTNLHRSNDCFRHTSPSILRDNSLLVPLNIGSDPHDASSF
TLRPTHVPDGNIDLLQCQSASSNTLQGWGDSKQDAVPHQTNLISSSVNSWLPQGVSSSFD
PSVMSSNNEHWRQL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagatgacaaaattgatggtgaaaaagagcaattccctgtgggcatgagagtt
cttgctgttgatgatgaccccacttgtcttaggctcttggatactttgctcaggcgctgc
cagtacaatgtaacgaccacgagtcaagcagtagtggcattgcagatgttaagggaaaac
aagaacaagttcgacttagttatcagtgatgtccatatgcctgacatggacggtttcaag
ctgctagagcttgtgggacttgagatggacttacctgtcataatgttgtctgcatatggt
gatacggagcttgtaatgaaaggtatcagtcatggagcttgtgattatttgctgaaacct
attagaattgaagagctaaagaatatatggcaacatgtaattagacgaaagaagcttgaa
ccaaaggattcaaaaaattctgataagccttgtgtcgactctggagattctagagaaggg
tttcaagggatcggagaacctgagccaaacggaaaaaataacagaaaaaggaaggaccaa
aatgaggacgacgatgaagagcgtgatgagaatggacagaatgatgatgatccctctatg
caaaagaaacctcgggttgtgtggtctgtagagctgcatcgcaaatttgttgcagctgtg
aatcagctaggtctagataaggctgtgccgaaaagaattttggatttgatgaatgtggaa
aatcttagtagggagaatgtggccagtcatcttcagaaatataggttatacctgaaaaga
atcagttgcgtaacaagccagcaagctaatatggctgcagctttaggaaatgcagattct
gcttttttgcgaatggcctctctaaatgcacttggaaatcttcctactatggatagttct
gggcagtttcagagtgtagcttttaattccttttcccccagtagcgtgcttggtaggttg
aactctcctgcaggtttgggaattcgtagcctctcttcttcaggagcggttcaatttggt
cttgctcagaattcaagcagctccataaatggtactgctaattttcactcagctccacaa
acaggaaatcagaatggaatactttatggcatgccaatgtcaactgaaatacatcagttg
ccacatagcaacaatgtaaattatggagtgctcccagttaccgaatcaatgatttatacc
aattccattagttctttggatggaaaagtaaatgtcactggcctaagcaacagtcaatat
tctgcttcagatggtttctcagatgtgaaaatacatgttggtagttcaagcaacgcttgt
tttggtatgccaaataactccctagtggtagatggacaccacctacattcccagggatta
ggtggttcggtaaatcaatctctagcaacagccaactccttgaattcaggtttttctttt
caaatgccagatatagaaagacgtggtacttggccaagtgctgttcagtcattaggcgac
caaacaaatttgcacagatcaaatgactgttttagacataccagtccaagtattctgaga
gataacagccttttagtgcccttaaatattggaagtgatcctcatgatgcttcttccttc
acactaagaccaacacatgtgccagatggtaacattgatctcttacaatgccaatcagcg
agcagcaacaccctacagggctggggggacagtaaacaagatgcagttcctcatcagaca
aatcttataagcagctcagtgaactcctggctaccgcaaggtgtttcaagttcattcgac
ccaagtgtaatgtcgtcaaacaacgagcattggagacaactttaa
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